(12 nodes) Mixed, incl. COPI-independent Golgi-to-ER retrograde traffic, and Dynactin complex network (Phytophthora sojae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G4YKI3_PHYSP	Uncharacterized protein. (182 aa)
	G4YPV3_PHYSP	Uncharacterized protein. (440 aa)
	G4YWR3_PHYSP	Dynactin light chain p62 subunit. (481 aa)
	G4Z0V3_PHYSP	CAP-Gly domain-containing protein. (833 aa)
	G4Z489_PHYSP	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (240 aa)
	G4Z771_PHYSP	Uncharacterized protein. (995 aa)
	G4Z877_PHYSP	CAP-Gly domain-containing protein. (201 aa)
	G4ZCL1_PHYSP	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (283 aa)
	G4ZKC6_PHYSP	Uncharacterized protein. (185 aa)
	G4ZMF4_PHYSP	Uncharacterized protein. (376 aa)
	G5A824_PHYSP	Uncharacterized protein. (190 aa)
	G5AIE0_PHYSP	Uncharacterized protein. (201 aa)

Your Current Organism:

Phytophthora sojae

NCBI taxonomy Id: 1094619
Other names: P. sojae strain P6497, Phytophthora sojae strain P6497

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G4YKI3_PHYSP	G4YPV3_PHYSP	G4YKI3	G4YPV3	Uncharacterized protein.	Uncharacterized protein.	0.993
G4YKI3_PHYSP	G4YWR3_PHYSP	G4YKI3	G4YWR3	Uncharacterized protein.	Dynactin light chain p62 subunit.	0.998
G4YKI3_PHYSP	G4Z0V3_PHYSP	G4YKI3	G4Z0V3	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.929
G4YKI3_PHYSP	G4Z489_PHYSP	G4YKI3	G4Z489	Uncharacterized protein.	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.792
G4YKI3_PHYSP	G4Z877_PHYSP	G4YKI3	G4Z877	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.929
G4YKI3_PHYSP	G4ZCL1_PHYSP	G4YKI3	G4ZCL1	Uncharacterized protein.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.959
G4YKI3_PHYSP	G4ZKC6_PHYSP	G4YKI3	G4ZKC6	Uncharacterized protein.	Uncharacterized protein.	0.998
G4YKI3_PHYSP	G4ZMF4_PHYSP	G4YKI3	G4ZMF4	Uncharacterized protein.	Uncharacterized protein.	0.710
G4YKI3_PHYSP	G5A824_PHYSP	G4YKI3	G5A824	Uncharacterized protein.	Uncharacterized protein.	0.710
G4YKI3_PHYSP	G5AIE0_PHYSP	G4YKI3	G5AIE0	Uncharacterized protein.	Uncharacterized protein.	0.792
G4YPV3_PHYSP	G4YKI3_PHYSP	G4YPV3	G4YKI3	Uncharacterized protein.	Uncharacterized protein.	0.993
G4YPV3_PHYSP	G4YWR3_PHYSP	G4YPV3	G4YWR3	Uncharacterized protein.	Dynactin light chain p62 subunit.	0.995
G4YPV3_PHYSP	G4Z0V3_PHYSP	G4YPV3	G4Z0V3	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.968
G4YPV3_PHYSP	G4Z489_PHYSP	G4YPV3	G4Z489	Uncharacterized protein.	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.937
G4YPV3_PHYSP	G4Z877_PHYSP	G4YPV3	G4Z877	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.968
G4YPV3_PHYSP	G4ZCL1_PHYSP	G4YPV3	G4ZCL1	Uncharacterized protein.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.980
G4YPV3_PHYSP	G4ZKC6_PHYSP	G4YPV3	G4ZKC6	Uncharacterized protein.	Uncharacterized protein.	0.992
G4YPV3_PHYSP	G4ZMF4_PHYSP	G4YPV3	G4ZMF4	Uncharacterized protein.	Uncharacterized protein.	0.762
G4YPV3_PHYSP	G5A824_PHYSP	G4YPV3	G5A824	Uncharacterized protein.	Uncharacterized protein.	0.762
G4YPV3_PHYSP	G5AIE0_PHYSP	G4YPV3	G5AIE0	Uncharacterized protein.	Uncharacterized protein.	0.937