(31 nodes) Mixed, incl. Hsp90 protein binding, and CFA20 domain network (Phytophthora sojae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G4YFL8_PHYSP	Uncharacterized protein. (224 aa)
	G4YH75_PHYSP	DUF667 domain-containing protein. (236 aa)
	G4YH76_PHYSP	Uncharacterized protein. (299 aa)
	G4YID6_PHYSP	DUF667 domain-containing protein. (212 aa)
	G4YKV3_PHYSP	Uncharacterized protein. (579 aa)
	G4YS67_PHYSP	Uncharacterized protein. (376 aa)
	G4YT06_PHYSP	Uncharacterized protein. (430 aa)
	G4YVW8_PHYSP	Uncharacterized protein. (629 aa)
	G4YYK0_PHYSP	Uncharacterized protein. (531 aa)
	G4YZK0_PHYSP	Sulfatase domain-containing protein. (1536 aa)
	G4Z394_PHYSP	Uncharacterized protein. (1205 aa)
	G4Z3Q5_PHYSP	Uncharacterized protein. (353 aa)
	G4Z4M8_PHYSP	WD_REPEATS_REGION domain-containing protein. (940 aa)
	G4ZEN3_PHYSP	Sulfatase domain-containing protein. (783 aa)
	G4ZF81_PHYSP	Rab-GAP TBC domain-containing protein. (879 aa)
	G4ZFU2_PHYSP	Uncharacterized protein. (536 aa)
	G4ZRE8_PHYSP	DUF667 domain-containing protein. (210 aa)
	G4ZS42_PHYSP	Uncharacterized protein. (69 aa)
	G4ZX95_PHYSP	Uncharacterized protein. (306 aa)
	G5A0U0_PHYSP	Uncharacterized protein. (473 aa)
	G5A450_PHYSP	Uncharacterized protein. (982 aa)
	G5A766_PHYSP	Enkurin domain-containing protein. (285 aa)
	G5AA52_PHYSP	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (452 aa)
	G5AAB5_PHYSP	Uncharacterized protein. (300 aa)
	G5AAJ3_PHYSP	Sulfatase domain-containing protein. (899 aa)
	G5AAJ4_PHYSP	Sulfatase domain-containing protein. (856 aa)
	G5AAJ5_PHYSP	Sulfatase domain-containing protein. (909 aa)
	G5AAJ6_PHYSP	Sulfatase domain-containing protein. (812 aa)
	G5AAP3_PHYSP	Uncharacterized protein. (624 aa)
	G5ACX9_PHYSP	Uncharacterized protein. (298 aa)
	G5AIA9_PHYSP	Sulfatase domain-containing protein. (766 aa)

Your Current Organism:

Phytophthora sojae

NCBI taxonomy Id: 1094619
Other names: P. sojae strain P6497, Phytophthora sojae strain P6497

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G4YFL8_PHYSP	G4YVW8_PHYSP	G4YFL8	G4YVW8	Uncharacterized protein.	Uncharacterized protein.	0.573
G4YFL8_PHYSP	G4YYK0_PHYSP	G4YFL8	G4YYK0	Uncharacterized protein.	Uncharacterized protein.	0.567
G4YFL8_PHYSP	G4Z3Q5_PHYSP	G4YFL8	G4Z3Q5	Uncharacterized protein.	Uncharacterized protein.	0.406
G4YFL8_PHYSP	G4Z4M8_PHYSP	G4YFL8	G4Z4M8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.484
G4YFL8_PHYSP	G4ZS42_PHYSP	G4YFL8	G4ZS42	Uncharacterized protein.	Uncharacterized protein.	0.524
G4YFL8_PHYSP	G5A766_PHYSP	G4YFL8	G5A766	Uncharacterized protein.	Enkurin domain-containing protein.	0.447
G4YFL8_PHYSP	G5AAP3_PHYSP	G4YFL8	G5AAP3	Uncharacterized protein.	Uncharacterized protein.	0.570
G4YH75_PHYSP	G4YVW8_PHYSP	G4YH75	G4YVW8	DUF667 domain-containing protein.	Uncharacterized protein.	0.451
G4YH75_PHYSP	G4YYK0_PHYSP	G4YH75	G4YYK0	DUF667 domain-containing protein.	Uncharacterized protein.	0.451
G4YH75_PHYSP	G4Z3Q5_PHYSP	G4YH75	G4Z3Q5	DUF667 domain-containing protein.	Uncharacterized protein.	0.438
G4YH75_PHYSP	G4ZFU2_PHYSP	G4YH75	G4ZFU2	DUF667 domain-containing protein.	Uncharacterized protein.	0.467
G4YH75_PHYSP	G5A0U0_PHYSP	G4YH75	G5A0U0	DUF667 domain-containing protein.	Uncharacterized protein.	0.467
G4YH75_PHYSP	G5A766_PHYSP	G4YH75	G5A766	DUF667 domain-containing protein.	Enkurin domain-containing protein.	0.495
G4YH75_PHYSP	G5AAP3_PHYSP	G4YH75	G5AAP3	DUF667 domain-containing protein.	Uncharacterized protein.	0.451
G4YH76_PHYSP	G4YVW8_PHYSP	G4YH76	G4YVW8	Uncharacterized protein.	Uncharacterized protein.	0.451
G4YH76_PHYSP	G4YYK0_PHYSP	G4YH76	G4YYK0	Uncharacterized protein.	Uncharacterized protein.	0.451
G4YH76_PHYSP	G4Z3Q5_PHYSP	G4YH76	G4Z3Q5	Uncharacterized protein.	Uncharacterized protein.	0.438
G4YH76_PHYSP	G4ZFU2_PHYSP	G4YH76	G4ZFU2	Uncharacterized protein.	Uncharacterized protein.	0.467
G4YH76_PHYSP	G5A0U0_PHYSP	G4YH76	G5A0U0	Uncharacterized protein.	Uncharacterized protein.	0.467
G4YH76_PHYSP	G5A766_PHYSP	G4YH76	G5A766	Uncharacterized protein.	Enkurin domain-containing protein.	0.495