(12 nodes) Peroxisomal membrane transport network (Phytophthora sojae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G4ZAJ0_PHYSP	Uncharacterized protein. (865 aa)
	G4YN85_PHYSP	Uncharacterized protein. (564 aa)
	G4YT74_PHYSP	TPR_REGION domain-containing protein. (673 aa)
	G4ZK77_PHYSP	Uncharacterized protein. (905 aa)
	G4ZK98_PHYSP	Long chain acyl-CoA transporter ABC transporter. (665 aa)
	G4ZKK9_PHYSP	Uncharacterized protein. (406 aa)
	G4ZRW8_PHYSP	Uncharacterized protein. (473 aa)
	G5A3D8_PHYSP	RING-type domain-containing protein. (187 aa)
	G5A3S2_PHYSP	Uncharacterized protein. (320 aa)
	G5A3Z0_PHYSP	Uncharacterized protein. (1106 aa)
	G5A7G1_PHYSP	Uncharacterized protein. (894 aa)
	G5ACU6_PHYSP	AAA domain-containing protein. (152 aa)

Your Current Organism:

Phytophthora sojae

NCBI taxonomy Id: 1094619
Other names: P. sojae strain P6497, Phytophthora sojae strain P6497

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G4YN85_PHYSP	G4YT74_PHYSP	G4YN85	G4YT74	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.473
G4YN85_PHYSP	G4ZAJ0_PHYSP	G4YN85	G4ZAJ0	Uncharacterized protein.	Uncharacterized protein.	0.473
G4YN85_PHYSP	G4ZK77_PHYSP	G4YN85	G4ZK77	Uncharacterized protein.	Uncharacterized protein.	0.841
G4YN85_PHYSP	G4ZK98_PHYSP	G4YN85	G4ZK98	Uncharacterized protein.	Long chain acyl-CoA transporter ABC transporter.	0.841
G4YN85_PHYSP	G4ZKK9_PHYSP	G4YN85	G4ZKK9	Uncharacterized protein.	Uncharacterized protein.	0.999
G4YN85_PHYSP	G4ZRW8_PHYSP	G4YN85	G4ZRW8	Uncharacterized protein.	Uncharacterized protein.	0.515
G4YN85_PHYSP	G5A3D8_PHYSP	G4YN85	G5A3D8	Uncharacterized protein.	RING-type domain-containing protein.	0.908
G4YN85_PHYSP	G5A3Z0_PHYSP	G4YN85	G5A3Z0	Uncharacterized protein.	Uncharacterized protein.	0.714
G4YN85_PHYSP	G5A7G1_PHYSP	G4YN85	G5A7G1	Uncharacterized protein.	Uncharacterized protein.	0.756
G4YN85_PHYSP	G5ACU6_PHYSP	G4YN85	G5ACU6	Uncharacterized protein.	AAA domain-containing protein.	0.714
G4YT74_PHYSP	G4YN85_PHYSP	G4YT74	G4YN85	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.473
G4YT74_PHYSP	G4ZKK9_PHYSP	G4YT74	G4ZKK9	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.555
G4YT74_PHYSP	G4ZRW8_PHYSP	G4YT74	G4ZRW8	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.995
G4YT74_PHYSP	G5A3D8_PHYSP	G4YT74	G5A3D8	TPR_REGION domain-containing protein.	RING-type domain-containing protein.	0.867
G4YT74_PHYSP	G5A3Z0_PHYSP	G4YT74	G5A3Z0	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.720
G4YT74_PHYSP	G5A7G1_PHYSP	G4YT74	G5A7G1	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.860
G4YT74_PHYSP	G5ACU6_PHYSP	G4YT74	G5ACU6	TPR_REGION domain-containing protein.	AAA domain-containing protein.	0.720
G4ZAJ0_PHYSP	G4YN85_PHYSP	G4ZAJ0	G4YN85	Uncharacterized protein.	Uncharacterized protein.	0.473
G4ZAJ0_PHYSP	G4ZKK9_PHYSP	G4ZAJ0	G4ZKK9	Uncharacterized protein.	Uncharacterized protein.	0.555
G4ZAJ0_PHYSP	G4ZRW8_PHYSP	G4ZAJ0	G4ZRW8	Uncharacterized protein.	Uncharacterized protein.	0.958