(102 nodes) Carboxylic acid catabolic process network (Phytophthora sojae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G4YJ08_PHYSP	ULP_PROTEASE domain-containing protein. (181 aa)
	G4YJ61_PHYSP	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. (157 aa)
	G4YJ99_PHYSP	Uncharacterized protein. (1065 aa)
	G4YJA7_PHYSP	Beta_elim_lyase domain-containing protein. (360 aa)
	G4YJA8_PHYSP	Beta_elim_lyase domain-containing protein. (349 aa)
	G4YJB2_PHYSP	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (283 aa)
	G4YKD7_PHYSP	Uncharacterized protein. (235 aa)
	G4YKI0_PHYSP	Aminotran_1_2 domain-containing protein. (404 aa)
	G4YMS7_PHYSP	Uncharacterized protein. (102 aa)
	G4YPI3_PHYSP	LNS2 domain-containing protein. (535 aa)
	G4YQ94_PHYSP	Cysteine dioxygenase. (186 aa)
	G4Z1Z6_PHYSP	Uncharacterized protein. (320 aa)
	G4YQN0_PHYSP	Uncharacterized protein. (764 aa)
	G4Z1Z5_PHYSP	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (495 aa)
	G4Z176_PHYSP	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. (432 aa)
	G4YYF4_PHYSP	Uncharacterized protein; Belongs to the GST superfamily. (225 aa)
	G4YYC9_PHYSP	Uncharacterized protein; Belongs to the GST superfamily. (252 aa)
	G4YXP4_PHYSP	Aldedh domain-containing protein. (530 aa)
	G4YXA8_PHYSP	PALP domain-containing protein. (275 aa)
	G4YWP2_PHYSP	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (676 aa)
	G4YWP1_PHYSP	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (612 aa)
	G4YVN0_PHYSP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
	G4YUD4_PHYSP	2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). (414 aa)
	G4YU67_PHYSP	Acyl-CoA dehydrogenase. (420 aa)
	G4YSZ5_PHYSP	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (705 aa)
	G4YSV8_PHYSP	Uncharacterized protein. (416 aa)
	G4YRJ9_PHYSP	Flavoprotein domain-containing protein. (164 aa)
	FDC1	Ferulic acid decarboxylase 1; Catalyzes the reversible decarboxylation of aromatic carboxylic acids like ferulic acid, p-coumaric acid or cinnamic acid, producing the corresponding vinyl derivatives 4-vinylphenol, 4- vinylguaiacol, and styrene, respectively, which play the role of aroma metabolites; Belongs to the UbiD family. UbiD-like/FDC subfamily. (468 aa)
	G4YR56_PHYSP	ULP_PROTEASE domain-containing protein. (162 aa)
	G4YR43_PHYSP	Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (255 aa)
	G4YEZ4_PHYSP	Lipoyl-binding domain-containing protein. (212 aa)
	G4YHC0_PHYSP	Aminotran_1_2 domain-containing protein. (492 aa)
	G4YHC5_PHYSP	Aminotran_1_2 domain-containing protein. (499 aa)
	G4YHC6_PHYSP	Uncharacterized protein. (473 aa)
	G4YIX0_PHYSP	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (311 aa)
	G4YIX2_PHYSP	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (314 aa)
	G4YJ07_PHYSP	Uncharacterized protein. (104 aa)
	G5AIT6_PHYSP	Uncharacterized protein. (909 aa)
	G5AI01_PHYSP	Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. (299 aa)
	G5AHP7_PHYSP	Uncharacterized protein. (226 aa)
	G5AGN2_PHYSP	Uncharacterized protein. (173 aa)
	G5AFR9_PHYSP	ULP_PROTEASE domain-containing protein. (338 aa)
	G5AFJ5_PHYSP	Arginase; Belongs to the arginase family. (355 aa)
	G5AD89_PHYSP	Epimerase domain-containing protein. (339 aa)
	G5AA61_PHYSP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (411 aa)
	G5A9Y4_PHYSP	Threonine dehydratase. (526 aa)
	G5A9K9_PHYSP	DAO domain-containing protein. (188 aa)
	G5A9K4_PHYSP	DAO domain-containing protein. (342 aa)
	G5A778_PHYSP	Ornithine aminotransferase. (432 aa)
	G5A426_PHYSP	Uncharacterized protein. (397 aa)
	G5A404_PHYSP	Uncharacterized protein. (173 aa)
	G5A3S2_PHYSP	Uncharacterized protein. (320 aa)
	G5A2H1_PHYSP	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (502 aa)
	G4ZZ43_PHYSP	Fumarylacetoacetase. (425 aa)
	G4ZYZ1_PHYSP	D-ser_dehydrat domain-containing protein. (425 aa)
	G4ZXF3_PHYSP	Uncharacterized protein. (103 aa)
	G4ZXF1_PHYSP	Uncharacterized protein. (91 aa)
	G4ZXF0_PHYSP	ULP_PROTEASE domain-containing protein. (154 aa)
	G4ZXD2_PHYSP	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (794 aa)
	G4ZSM4_PHYSP	Uncharacterized protein. (195 aa)
	G4ZSB8_PHYSP	ETF domain-containing protein. (330 aa)
	G4ZQR5_PHYSP	Threonine dehydratase. (540 aa)
	G4ZQF8_PHYSP	Pyruvate carboxyltransferase domain-containing protein. (545 aa)
	G4ZQ66_PHYSP	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (464 aa)
	G4ZPP5_PHYSP	Transket_pyr domain-containing protein. (321 aa)
	G4ZN49_PHYSP	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (486 aa)
	G4ZMR8_PHYSP	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (326 aa)
	G4ZK98_PHYSP	Long chain acyl-CoA transporter ABC transporter. (665 aa)
	G4ZK77_PHYSP	Uncharacterized protein. (905 aa)
	G4ZJD7_PHYSP	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (400 aa)
	G4ZIY6_PHYSP	Uncharacterized protein. (542 aa)
	G4ZIK4_PHYSP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (436 aa)
	G4ZI63_PHYSP	Uncharacterized protein. (427 aa)
	G4ZH13_PHYSP	Uncharacterized protein; Belongs to the GST superfamily. (330 aa)
	G4ZE31_PHYSP	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (638 aa)
	G4ZDU5_PHYSP	ULP_PROTEASE domain-containing protein. (181 aa)
	G4ZDU4_PHYSP	Uncharacterized protein. (104 aa)
	G4ZBB8_PHYSP	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1001 aa)
	G4ZB12_PHYSP	Uncharacterized protein; Belongs to the aldehyde dehydrogenase family. (588 aa)
	G4ZAZ5_PHYSP	Uncharacterized protein. (345 aa)
	G4ZAN6_PHYSP	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (659 aa)
	G4ZAM0_PHYSP	Uncharacterized protein. (343 aa)
	G4ZA70_PHYSP	Fe-ADH domain-containing protein. (423 aa)
	G4ZA59_PHYSP	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (520 aa)
	G4ZA57_PHYSP	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (384 aa)
	G4Z9V2_PHYSP	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (594 aa)
	G4Z9U6_PHYSP	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (661 aa)
	G4Z9U3_PHYSP	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (640 aa)
	G4Z962_PHYSP	Uncharacterized protein. (440 aa)
	G4Z8H5_PHYSP	Uncharacterized protein. (420 aa)
	G4Z824_PHYSP	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (640 aa)
	G4Z822_PHYSP	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (721 aa)
	G4Z7E5_PHYSP	Uncharacterized protein. (328 aa)
	G4Z715_PHYSP	Uncharacterized protein. (610 aa)
	G4Z6U2_PHYSP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (516 aa)
	G4Z665_PHYSP	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (572 aa)
	G4Z592_PHYSP	Uncharacterized protein. (262 aa)
	G4Z589_PHYSP	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (284 aa)
	G4Z467_PHYSP	LNS2 domain-containing protein. (649 aa)
	G4Z3A5_PHYSP	Uncharacterized protein. (602 aa)
	G4Z2A3_PHYSP	Uncharacterized protein. (800 aa)
	G4Z2A2_PHYSP	Uncharacterized protein. (413 aa)

Your Current Organism:

Phytophthora sojae

NCBI taxonomy Id: 1094619
Other names: P. sojae strain P6497, Phytophthora sojae strain P6497

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FDC1	G4YRJ9_PHYSP	G4YRJ8	G4YRJ9	Ferulic acid decarboxylase 1; Catalyzes the reversible decarboxylation of aromatic carboxylic acids like ferulic acid, p-coumaric acid or cinnamic acid, producing the corresponding vinyl derivatives 4-vinylphenol, 4- vinylguaiacol, and styrene, respectively, which play the role of aroma metabolites; Belongs to the UbiD family. UbiD-like/FDC subfamily.	Flavoprotein domain-containing protein.	0.969
G4YEZ4_PHYSP	G4YJ61_PHYSP	G4YEZ4	G4YJ61	Lipoyl-binding domain-containing protein.	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	0.740
G4YEZ4_PHYSP	G4YSV8_PHYSP	G4YEZ4	G4YSV8	Lipoyl-binding domain-containing protein.	Uncharacterized protein.	0.416
G4YEZ4_PHYSP	G4YU67_PHYSP	G4YEZ4	G4YU67	Lipoyl-binding domain-containing protein.	Acyl-CoA dehydrogenase.	0.941
G4YEZ4_PHYSP	G4YUD4_PHYSP	G4YEZ4	G4YUD4	Lipoyl-binding domain-containing protein.	2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).	0.891
G4YEZ4_PHYSP	G4YVN0_PHYSP	G4YEZ4	G4YVN0	Lipoyl-binding domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.829
G4YEZ4_PHYSP	G4Z2A2_PHYSP	G4YEZ4	G4Z2A2	Lipoyl-binding domain-containing protein.	Uncharacterized protein.	0.416
G4YEZ4_PHYSP	G4Z6U2_PHYSP	G4YEZ4	G4Z6U2	Lipoyl-binding domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.829
G4YEZ4_PHYSP	G4ZBB8_PHYSP	G4YEZ4	G4ZBB8	Lipoyl-binding domain-containing protein.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.586
G4YEZ4_PHYSP	G4ZI63_PHYSP	G4YEZ4	G4ZI63	Lipoyl-binding domain-containing protein.	Uncharacterized protein.	0.416
G4YEZ4_PHYSP	G4ZIK4_PHYSP	G4YEZ4	G4ZIK4	Lipoyl-binding domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.841
G4YEZ4_PHYSP	G4ZIY6_PHYSP	G4YEZ4	G4ZIY6	Lipoyl-binding domain-containing protein.	Uncharacterized protein.	0.908
G4YEZ4_PHYSP	G4ZJD7_PHYSP	G4YEZ4	G4ZJD7	Lipoyl-binding domain-containing protein.	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.	0.556
G4YEZ4_PHYSP	G4ZPP5_PHYSP	G4YEZ4	G4ZPP5	Lipoyl-binding domain-containing protein.	Transket_pyr domain-containing protein.	0.890
G4YEZ4_PHYSP	G4ZQ66_PHYSP	G4YEZ4	G4ZQ66	Lipoyl-binding domain-containing protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.544
G4YEZ4_PHYSP	G4ZQF8_PHYSP	G4YEZ4	G4ZQF8	Lipoyl-binding domain-containing protein.	Pyruvate carboxyltransferase domain-containing protein.	0.831
G4YEZ4_PHYSP	G4ZSB8_PHYSP	G4YEZ4	G4ZSB8	Lipoyl-binding domain-containing protein.	ETF domain-containing protein.	0.481
G4YEZ4_PHYSP	G5A2H1_PHYSP	G4YEZ4	G5A2H1	Lipoyl-binding domain-containing protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.544
G4YEZ4_PHYSP	G5AA61_PHYSP	G4YEZ4	G5AA61	Lipoyl-binding domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.829
G4YHC0_PHYSP	G4YHC5_PHYSP	G4YHC0	G4YHC5	Aminotran_1_2 domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.900