(78 nodes) System development network (Phytophthora sojae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G4Z5H4_PHYSP	Uncharacterized protein. (991 aa)
	G4Z5K8_PHYSP	Uncharacterized protein. (692 aa)
	G4Z7E9_PHYSP	Uncharacterized protein. (1118 aa)
	G4ZAY7_PHYSP	DUF3342 domain-containing protein. (229 aa)
	G4ZDF6_PHYSP	Uncharacterized protein. (279 aa)
	G4ZDM7_PHYSP	Protein kinase domain-containing protein. (420 aa)
	G4ZF20_PHYSP	PHD domain-containing protein. (288 aa)
	G4ZFD0_PHYSP	Uncharacterized protein. (713 aa)
	G4ZFD1_PHYSP	C2 domain-containing protein. (3704 aa)
	G4ZG47_PHYSP	C2H2-type domain-containing protein. (188 aa)
	G4ZIC6_PHYSP	Uncharacterized protein. (1323 aa)
	G4ZIG1_PHYSP	Uncharacterized protein. (199 aa)
	G4YY88_PHYSP	Uncharacterized protein. (572 aa)
	G4YY21_PHYSP	Uncharacterized protein. (1938 aa)
	G4YWT1_PHYSP	Uncharacterized protein. (468 aa)
	G4YWT0_PHYSP	IPT/TIG domain-containing protein. (185 aa)
	G4YWS8_PHYSP	Uncharacterized protein. (4058 aa)
	G4YWK4_PHYSP	SAM domain-containing protein. (113 aa)
	G4YWJ9_PHYSP	Uncharacterized protein. (338 aa)
	G4YWI8_PHYSP	CS domain-containing protein. (162 aa)
	G4YW07_PHYSP	PDZ domain-containing protein. (615 aa)
	G4YU69_PHYSP	PHD-type domain-containing protein. (528 aa)
	G4YU50_PHYSP	Uncharacterized protein. (719 aa)
	G4YU48_PHYSP	Uncharacterized protein. (414 aa)
	G4YTW4_PHYSP	Uncharacterized protein. (858 aa)
	G4YS46_PHYSP	Uncharacterized protein. (7804 aa)
	G4YQS6_PHYSP	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1085 aa)
	G4YPR5_PHYSP	Uncharacterized protein. (1020 aa)
	G4YNA1_PHYSP	Uncharacterized protein. (469 aa)
	G4YLG5_PHYSP	Uncharacterized protein. (383 aa)
	G4YIQ7_PHYSP	Uncharacterized protein. (389 aa)
	G4YIM4_PHYSP	WD_REPEATS_REGION domain-containing protein. (1505 aa)
	G4YF20_PHYSP	C3H1-type domain-containing protein. (311 aa)
	G4YEW9_PHYSP	Uncharacterized protein. (883 aa)
	G4YTM8_PHYSP	Uncharacterized protein. (903 aa)
	G4YYI8_PHYSP	ARID domain-containing protein. (677 aa)
	G5AF65_PHYSP	Uncharacterized protein. (854 aa)
	G5AF49_PHYSP	Uncharacterized protein. (233 aa)
	G5AEU0_PHYSP	Uncharacterized protein. (576 aa)
	G5ADN9_PHYSP	Uncharacterized protein. (111 aa)
	G5AAU7_PHYSP	Uncharacterized protein. (338 aa)
	G5AAP8_PHYSP	Uncharacterized protein. (1708 aa)
	G5AA37_PHYSP	Uncharacterized protein. (322 aa)
	G5A9W7_PHYSP	Uncharacterized protein. (204 aa)
	G5A9C1_PHYSP	CKK domain-containing protein. (118 aa)
	G5A7A4_PHYSP	Uncharacterized protein. (2068 aa)
	G5A663_PHYSP	Cellulase-9, endo-1,4-beta-glucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (540 aa)
	G5A5F6_PHYSP	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1430 aa)
	G5A3V9_PHYSP	Uncharacterized protein. (4375 aa)
	G5A3P0_PHYSP	WD_REPEATS_REGION domain-containing protein. (767 aa)
	G5A2N9_PHYSP	Uncharacterized protein. (239 aa)
	G5A2I8_PHYSP	U-box domain-containing protein. (566 aa)
	G5A234_PHYSP	Uncharacterized protein. (123 aa)
	G5A232_PHYSP	GMP_PDE_delta domain-containing protein. (238 aa)
	G5A1U4_PHYSP	EGF-like domain-containing protein. (355 aa)
	G4ZZF0_PHYSP	EGF-like domain-containing protein. (338 aa)
	G4ZZ44_PHYSP	Uncharacterized protein. (471 aa)
	G4ZXA7_PHYSP	Uncharacterized protein. (297 aa)
	G4ZX13_PHYSP	LRRNT domain-containing protein. (166 aa)
	G4ZW60_PHYSP	Uncharacterized protein. (357 aa)
	G4ZTV7_PHYSP	Uncharacterized protein. (522 aa)
	G4ZTR9_PHYSP	Uncharacterized protein. (517 aa)
	G4ZLA0_PHYSP	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1338 aa)
	G4ZKC6_PHYSP	Uncharacterized protein. (185 aa)
	G4ZK80_PHYSP	Non-specific serine/threonine protein kinase. (565 aa)
	G4YYN4_PHYSP	PHD domain-containing protein. (1094 aa)
	G4Z039_PHYSP	Uncharacterized protein. (589 aa)
	G4Z1T6_PHYSP	Protein kinase domain-containing protein. (245 aa)
	G4Z2N5_PHYSP	Uncharacterized protein. (145 aa)
	G4Z2P1_PHYSP	Uncharacterized protein. (251 aa)
	G4Z2P3_PHYSP	Uncharacterized protein. (244 aa)
	G4Z3F8_PHYSP	Uncharacterized protein. (276 aa)
	G4Z422_PHYSP	Uncharacterized protein. (876 aa)
	G4Z433_PHYSP	Uncharacterized protein. (460 aa)
	G4Z4L5_PHYSP	Uncharacterized protein. (172 aa)
	G4Z4R6_PHYSP	Uncharacterized protein. (624 aa)
	G4Z577_PHYSP	Uncharacterized protein. (615 aa)
	G4Z578_PHYSP	TMF_TATA_bd domain-containing protein. (131 aa)

Your Current Organism:

Phytophthora sojae

NCBI taxonomy Id: 1094619
Other names: P. sojae strain P6497, Phytophthora sojae strain P6497

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G4YIM4_PHYSP	G4Z422_PHYSP	G4YIM4	G4Z422	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.834
G4YIM4_PHYSP	G4Z4R6_PHYSP	G4YIM4	G4Z4R6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.584
G4YIM4_PHYSP	G4ZTV7_PHYSP	G4YIM4	G4ZTV7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.838
G4YIM4_PHYSP	G4ZZ44_PHYSP	G4YIM4	G4ZZ44	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.728
G4YIM4_PHYSP	G5A3P0_PHYSP	G4YIM4	G5A3P0	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.873
G4YIM4_PHYSP	G5A7A4_PHYSP	G4YIM4	G5A7A4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.505
G4YIM4_PHYSP	G5A9W7_PHYSP	G4YIM4	G5A9W7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.455
G4YNA1_PHYSP	G5A7A4_PHYSP	G4YNA1	G5A7A4	Uncharacterized protein.	Uncharacterized protein.	0.499
G4YQS6_PHYSP	G4Z7E9_PHYSP	G4YQS6	G4Z7E9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein.	0.417
G4YU69_PHYSP	G4YYI8_PHYSP	G4YU69	G4YYI8	PHD-type domain-containing protein.	ARID domain-containing protein.	0.896
G4YU69_PHYSP	G5A2I8_PHYSP	G4YU69	G5A2I8	PHD-type domain-containing protein.	U-box domain-containing protein.	0.893
G4YYI8_PHYSP	G4YU69_PHYSP	G4YYI8	G4YU69	ARID domain-containing protein.	PHD-type domain-containing protein.	0.896
G4YYI8_PHYSP	G4ZF20_PHYSP	G4YYI8	G4ZF20	ARID domain-containing protein.	PHD domain-containing protein.	0.896
G4YYI8_PHYSP	G5A2I8_PHYSP	G4YYI8	G5A2I8	ARID domain-containing protein.	U-box domain-containing protein.	0.913
G4YYN4_PHYSP	G5A2I8_PHYSP	G4YYN4	G5A2I8	PHD domain-containing protein.	U-box domain-containing protein.	0.666
G4Z1T6_PHYSP	G4Z7E9_PHYSP	G4Z1T6	G4Z7E9	Protein kinase domain-containing protein.	Uncharacterized protein.	0.417
G4Z422_PHYSP	G4YIM4_PHYSP	G4Z422	G4YIM4	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.834
G4Z422_PHYSP	G4Z4R6_PHYSP	G4Z422	G4Z4R6	Uncharacterized protein.	Uncharacterized protein.	0.864
G4Z422_PHYSP	G4ZTV7_PHYSP	G4Z422	G4ZTV7	Uncharacterized protein.	Uncharacterized protein.	0.988
G4Z422_PHYSP	G4ZZ44_PHYSP	G4Z422	G4ZZ44	Uncharacterized protein.	Uncharacterized protein.	0.917