(13 nodes) Cytosolic small ribosomal subunit network (Phytophthora sojae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G4YTV9_PHYSP	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (137 aa)
	G4YVP6_PHYSP	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (155 aa)
	G4YWA6_PHYSP	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (261 aa)
	G4YYZ2_PHYSP	Ribosomal_S10 domain-containing protein. (120 aa)
	G4ZB00_PHYSP	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (284 aa)
	G4ZFB3_PHYSP	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (111 aa)
	G5AEB2_PHYSP	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (94 aa)
	G5A0D4_PHYSP	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	G4ZUC1_PHYSP	Uncharacterized protein. (154 aa)
	G4ZT11_PHYSP	Uncharacterized protein. (131 aa)
	G4ZRI3_PHYSP	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (190 aa)
	G4ZMR6_PHYSP	S10_plectin domain-containing protein. (144 aa)
	G4YM34_PHYSP	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (86 aa)

Your Current Organism:

Phytophthora sojae

NCBI taxonomy Id: 1094619
Other names: P. sojae strain P6497, Phytophthora sojae strain P6497

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G4YM34_PHYSP	G4YTV9_PHYSP	G4YM34	G4YTV9	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
G4YM34_PHYSP	G4YVP6_PHYSP	G4YM34	G4YVP6	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
G4YM34_PHYSP	G4YWA6_PHYSP	G4YM34	G4YWA6	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
G4YM34_PHYSP	G4YYZ2_PHYSP	G4YM34	G4YYZ2	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Ribosomal_S10 domain-containing protein.	0.999
G4YM34_PHYSP	G4ZB00_PHYSP	G4YM34	G4ZB00	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.999
G4YM34_PHYSP	G4ZFB3_PHYSP	G4YM34	G4ZFB3	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
G4YM34_PHYSP	G4ZMR6_PHYSP	G4YM34	G4ZMR6	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	S10_plectin domain-containing protein.	0.999
G4YM34_PHYSP	G4ZRI3_PHYSP	G4YM34	G4ZRI3	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
G4YM34_PHYSP	G4ZT11_PHYSP	G4YM34	G4ZT11	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Uncharacterized protein.	0.999
G4YM34_PHYSP	G4ZUC1_PHYSP	G4YM34	G4ZUC1	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Uncharacterized protein.	0.999
G4YM34_PHYSP	G5A0D4_PHYSP	G4YM34	G5A0D4	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.999
G4YM34_PHYSP	G5AEB2_PHYSP	G4YM34	G5AEB2	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
G4YTV9_PHYSP	G4YM34_PHYSP	G4YTV9	G4YM34	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
G4YTV9_PHYSP	G4YVP6_PHYSP	G4YTV9	G4YVP6	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
G4YTV9_PHYSP	G4YWA6_PHYSP	G4YTV9	G4YWA6	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
G4YTV9_PHYSP	G4YYZ2_PHYSP	G4YTV9	G4YYZ2	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	Ribosomal_S10 domain-containing protein.	0.999
G4YTV9_PHYSP	G4ZB00_PHYSP	G4YTV9	G4ZB00	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.999
G4YTV9_PHYSP	G4ZFB3_PHYSP	G4YTV9	G4ZFB3	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
G4YTV9_PHYSP	G4ZMR6_PHYSP	G4YTV9	G4ZMR6	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	S10_plectin domain-containing protein.	0.999
G4YTV9_PHYSP	G4ZRI3_PHYSP	G4YTV9	G4ZRI3	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999