12 items (Phytophthora sojae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G4YH82_PHYSP	Uncharacterized protein. (211 aa)
	G4YIT3_PHYSP	Uncharacterized protein. (233 aa)
	G4YQ51_PHYSP	Kin17_mid domain-containing protein. (415 aa)
	G4YTH8_PHYSP	Transcription elongation factor SPT5. (1104 aa)
	G4Z344_PHYSP	Ribosomal_L2_C domain-containing protein. (152 aa)
	G4ZCL8_PHYSP	Eukaryotic translation initiation factor 5A. (162 aa)
	G4ZIX6_PHYSP	Ribosomal_L14e domain-containing protein. (135 aa)
	G4ZPH1_PHYSP	Uncharacterized protein. (143 aa)
	G4ZTK0_PHYSP	KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family. (138 aa)
	G5A4U4_PHYSP	Ribosomal_L2_C domain-containing protein. (256 aa)
	G5ADS2_PHYSP	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (261 aa)
	G4YIK7_PHYSP	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (221 aa)

Your Current Organism:

Phytophthora sojae

NCBI taxonomy Id: 1094619
Other names: P. sojae strain P6497, Phytophthora sojae strain P6497

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G4YH82_PHYSP	G4YIK7_PHYSP	G4YH82	G4YIK7	Uncharacterized protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.671
G4YH82_PHYSP	G4YIT3_PHYSP	G4YH82	G4YIT3	Uncharacterized protein.	Uncharacterized protein.	0.671
G4YH82_PHYSP	G4Z344_PHYSP	G4YH82	G4Z344	Uncharacterized protein.	Ribosomal_L2_C domain-containing protein.	0.898
G4YH82_PHYSP	G4ZIX6_PHYSP	G4YH82	G4ZIX6	Uncharacterized protein.	Ribosomal_L14e domain-containing protein.	0.671
G4YH82_PHYSP	G4ZPH1_PHYSP	G4YH82	G4ZPH1	Uncharacterized protein.	Uncharacterized protein.	0.939
G4YH82_PHYSP	G5A4U4_PHYSP	G4YH82	G5A4U4	Uncharacterized protein.	Ribosomal_L2_C domain-containing protein.	0.898
G4YH82_PHYSP	G5ADS2_PHYSP	G4YH82	G5ADS2	Uncharacterized protein.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.970
G4YIK7_PHYSP	G4YH82_PHYSP	G4YIK7	G4YH82	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	Uncharacterized protein.	0.671
G4YIK7_PHYSP	G4YIT3_PHYSP	G4YIK7	G4YIT3	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	Uncharacterized protein.	0.901
G4YIK7_PHYSP	G4Z344_PHYSP	G4YIK7	G4Z344	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	Ribosomal_L2_C domain-containing protein.	0.836
G4YIK7_PHYSP	G4ZCL8_PHYSP	G4YIK7	G4ZCL8	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	Eukaryotic translation initiation factor 5A.	0.945
G4YIK7_PHYSP	G4ZIX6_PHYSP	G4YIK7	G4ZIX6	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	Ribosomal_L14e domain-containing protein.	0.993
G4YIK7_PHYSP	G4ZPH1_PHYSP	G4YIK7	G4ZPH1	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	Uncharacterized protein.	0.993
G4YIK7_PHYSP	G5A4U4_PHYSP	G4YIK7	G5A4U4	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	Ribosomal_L2_C domain-containing protein.	0.990
G4YIK7_PHYSP	G5ADS2_PHYSP	G4YIK7	G5ADS2	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.984
G4YIT3_PHYSP	G4YH82_PHYSP	G4YIT3	G4YH82	Uncharacterized protein.	Uncharacterized protein.	0.671
G4YIT3_PHYSP	G4YIK7_PHYSP	G4YIT3	G4YIK7	Uncharacterized protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.901
G4YIT3_PHYSP	G4Z344_PHYSP	G4YIT3	G4Z344	Uncharacterized protein.	Ribosomal_L2_C domain-containing protein.	0.836
G4YIT3_PHYSP	G4ZCL8_PHYSP	G4YIT3	G4ZCL8	Uncharacterized protein.	Eukaryotic translation initiation factor 5A.	0.945
G4YIT3_PHYSP	G4ZIX6_PHYSP	G4YIT3	G4ZIX6	Uncharacterized protein.	Ribosomal_L14e domain-containing protein.	0.993