(17 nodes) Histidine kinase/HSP90-like ATPase superfamily network (Phytophthora sojae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G4ZIK8_PHYSP	Uncharacterized protein. (167 aa)
	G4ZJ61_PHYSP	Uncharacterized protein. (2017 aa)
	G4ZJ94_PHYSP	Histidine kinase A two component receptor. (4145 aa)
	G4ZR09_PHYSP	Uncharacterized protein. (462 aa)
	G4ZD84_PHYSP	Protein-serine/threonine kinase. (486 aa)
	G4ZJ99_PHYSP	Histidine kinase A bacterial sensor-like protein. (2836 aa)
	G4ZKL7_PHYSP	DUF3883 domain-containing protein. (2724 aa)
	G5A2K0_PHYSP	HATPase_c domain-containing protein. (706 aa)
	G5AAW7_PHYSP	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1289 aa)
	G4ZLA4_PHYSP	Protein-serine/threonine kinase. (375 aa)
	G4ZD85_PHYSP	Protein-serine/threonine kinase. (467 aa)
	G4ZD89_PHYSP	Protein-serine/threonine kinase. (437 aa)
	G4YZA0_PHYSP	Uncharacterized protein. (4858 aa)
	G4YWK2_PHYSP	Uncharacterized protein. (220 aa)
	G4YVZ7_PHYSP	HATPase_c domain-containing protein. (761 aa)
	G4YN76_PHYSP	Protein-serine/threonine kinase. (379 aa)
	G4ZH94_PHYSP	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1340 aa)

Your Current Organism:

Phytophthora sojae

NCBI taxonomy Id: 1094619
Other names: P. sojae strain P6497, Phytophthora sojae strain P6497

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G4YVZ7_PHYSP	G4YZA0_PHYSP	G4YVZ7	G4YZA0	HATPase_c domain-containing protein.	Uncharacterized protein.	0.425
G4YWK2_PHYSP	G4ZIK8_PHYSP	G4YWK2	G4ZIK8	Uncharacterized protein.	Uncharacterized protein.	0.918
G4YZA0_PHYSP	G4YVZ7_PHYSP	G4YZA0	G4YVZ7	Uncharacterized protein.	HATPase_c domain-containing protein.	0.425
G4YZA0_PHYSP	G4ZH94_PHYSP	G4YZA0	G4ZH94	Uncharacterized protein.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.555
G4YZA0_PHYSP	G5AAW7_PHYSP	G4YZA0	G5AAW7	Uncharacterized protein.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.555
G4ZH94_PHYSP	G4YZA0_PHYSP	G4ZH94	G4YZA0	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Uncharacterized protein.	0.555
G4ZIK8_PHYSP	G4YWK2_PHYSP	G4ZIK8	G4YWK2	Uncharacterized protein.	Uncharacterized protein.	0.918
G5AAW7_PHYSP	G4YZA0_PHYSP	G5AAW7	G4YZA0	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Uncharacterized protein.	0.555