(13 nodes) TCP-1/cpn60 chaperonin family network (Phytophthora sojae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G4YX50_PHYSP	Phosphatidylinositol 3-phosphate 5-kinase. (1926 aa)
	G4YEQ0_PHYSP	Uncharacterized protein. (595 aa)
	G4YNM8_PHYSP	Uncharacterized protein. (545 aa)
	G4YNR4_PHYSP	Uncharacterized protein. (540 aa)
	G4YR30_PHYSP	Uncharacterized protein. (546 aa)
	G4YU59_PHYSP	Uncharacterized protein. (1590 aa)
	G4YVH6_PHYSP	Uncharacterized protein. (535 aa)
	G4YX13_PHYSP	Uncharacterized protein. (526 aa)
	G4ZEW0_PHYSP	T-complex protein 1 subunit gamma. (530 aa)
	G4ZN71_PHYSP	T-complex protein 1 subunit delta. (533 aa)
	G4ZS87_PHYSP	Uncharacterized protein. (208 aa)
	G5A5Z4_PHYSP	Uncharacterized protein; Belongs to the chaperonin (HSP60) family. (576 aa)
	G5AIM9_PHYSP	Uncharacterized protein. (536 aa)

Your Current Organism:

Phytophthora sojae

NCBI taxonomy Id: 1094619
Other names: P. sojae strain P6497, Phytophthora sojae strain P6497

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G4YEQ0_PHYSP	G4YNR4_PHYSP	G4YEQ0	G4YNR4	Uncharacterized protein.	Uncharacterized protein.	0.992
G4YEQ0_PHYSP	G4YR30_PHYSP	G4YEQ0	G4YR30	Uncharacterized protein.	Uncharacterized protein.	0.918
G4YEQ0_PHYSP	G4YVH6_PHYSP	G4YEQ0	G4YVH6	Uncharacterized protein.	Uncharacterized protein.	0.918
G4YEQ0_PHYSP	G4YX13_PHYSP	G4YEQ0	G4YX13	Uncharacterized protein.	Uncharacterized protein.	0.993
G4YEQ0_PHYSP	G4ZEW0_PHYSP	G4YEQ0	G4ZEW0	Uncharacterized protein.	T-complex protein 1 subunit gamma.	0.962
G4YEQ0_PHYSP	G4ZN71_PHYSP	G4YEQ0	G4ZN71	Uncharacterized protein.	T-complex protein 1 subunit delta.	0.993
G4YEQ0_PHYSP	G4ZS87_PHYSP	G4YEQ0	G4ZS87	Uncharacterized protein.	Uncharacterized protein.	0.918
G4YEQ0_PHYSP	G5A5Z4_PHYSP	G4YEQ0	G5A5Z4	Uncharacterized protein.	Uncharacterized protein; Belongs to the chaperonin (HSP60) family.	0.804
G4YEQ0_PHYSP	G5AIM9_PHYSP	G4YEQ0	G5AIM9	Uncharacterized protein.	Uncharacterized protein.	0.993
G4YNM8_PHYSP	G4YNR4_PHYSP	G4YNM8	G4YNR4	Uncharacterized protein.	Uncharacterized protein.	0.992
G4YNM8_PHYSP	G4YR30_PHYSP	G4YNM8	G4YR30	Uncharacterized protein.	Uncharacterized protein.	0.923
G4YNM8_PHYSP	G4YVH6_PHYSP	G4YNM8	G4YVH6	Uncharacterized protein.	Uncharacterized protein.	0.918
G4YNM8_PHYSP	G4YX13_PHYSP	G4YNM8	G4YX13	Uncharacterized protein.	Uncharacterized protein.	0.993
G4YNM8_PHYSP	G4ZEW0_PHYSP	G4YNM8	G4ZEW0	Uncharacterized protein.	T-complex protein 1 subunit gamma.	0.964
G4YNM8_PHYSP	G4ZN71_PHYSP	G4YNM8	G4ZN71	Uncharacterized protein.	T-complex protein 1 subunit delta.	0.993
G4YNM8_PHYSP	G4ZS87_PHYSP	G4YNM8	G4ZS87	Uncharacterized protein.	Uncharacterized protein.	0.918
G4YNM8_PHYSP	G5A5Z4_PHYSP	G4YNM8	G5A5Z4	Uncharacterized protein.	Uncharacterized protein; Belongs to the chaperonin (HSP60) family.	0.804
G4YNM8_PHYSP	G5AIM9_PHYSP	G4YNM8	G5AIM9	Uncharacterized protein.	Uncharacterized protein.	0.993
G4YNR4_PHYSP	G4YEQ0_PHYSP	G4YNR4	G4YEQ0	Uncharacterized protein.	Uncharacterized protein.	0.992
G4YNR4_PHYSP	G4YNM8_PHYSP	G4YNR4	G4YNM8	Uncharacterized protein.	Uncharacterized protein.	0.992