STRINGSTRING
GCA_000236165_02090 GCA_000236165_02090 GCA_000236165_00021 GCA_000236165_00021 pagP pagP GCA_000236165_00070 GCA_000236165_00070 dltB dltB yibH_2 yibH_2 grsB grsB GCA_000236165_00732 GCA_000236165_00732 GCA_000236165_00747 GCA_000236165_00747 cpxA cpxA ompR_2 ompR_2 GCA_000236165_00808 GCA_000236165_00808 rlpA rlpA GCA_000236165_00867 GCA_000236165_00867 exbD exbD ynhG ynhG GCA_000236165_01085 GCA_000236165_01085 GCA_000236165_01088 GCA_000236165_01088 GCA_000236165_01096 GCA_000236165_01096 eptA eptA GCA_000236165_01199 GCA_000236165_01199 degQ degQ mltD mltD dsbA_1 dsbA_1 GCA_000236165_01429 GCA_000236165_01429 GCA_000236165_01516 GCA_000236165_01516 GCA_000236165_01549 GCA_000236165_01549 htrA htrA macA_1 macA_1 bepE_1 bepE_1 GCA_000236165_01597 GCA_000236165_01597 tolC tolC araC araC GCA_000236165_01750 GCA_000236165_01750 sugE sugE GCA_000236165_01833 GCA_000236165_01833 pla pla bepF_2 bepF_2 bepG bepG dsbA_2 dsbA_2 rlpA-2 rlpA-2 lpxA_2 lpxA_2 ppiB ppiB amiC amiC GCA_000236165_02773 GCA_000236165_02773 lgrD lgrD bepF_1 bepF_1 mdtE_2 mdtE_2 bepE_2 bepE_2 mexB mexB mexA mexA GCA_000236165_02477 GCA_000236165_02477 lpxA_1 lpxA_1 GCA_000236165_02405 GCA_000236165_02405 GCA_000236165_02357 GCA_000236165_02357 GCA_000236165_02347 GCA_000236165_02347 arnT arnT
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000236165_02090Unannotated protein. (161 aa)
GCA_000236165_00021Unannotated protein. (305 aa)
pagPUnannotated protein; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. (232 aa)
GCA_000236165_00070Unannotated protein. (542 aa)
dltBUnannotated protein; Belongs to the membrane-bound acyltransferase family. (493 aa)
yibH_2Unannotated protein. (331 aa)
grsBUnannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family. (1093 aa)
GCA_000236165_00732Unannotated protein. (190 aa)
GCA_000236165_00747Unannotated protein. (157 aa)
cpxAUnannotated protein. (468 aa)
ompR_2Unannotated protein. (226 aa)
GCA_000236165_00808Unannotated protein. (224 aa)
rlpAUnannotated protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (282 aa)
GCA_000236165_00867Unannotated protein. (226 aa)
exbDUnannotated protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (152 aa)
ynhGUnannotated protein. (328 aa)
GCA_000236165_01085Unannotated protein. (421 aa)
GCA_000236165_01088Unannotated protein. (464 aa)
GCA_000236165_01096Unannotated protein. (259 aa)
eptAUnannotated protein. (545 aa)
GCA_000236165_01199Unannotated protein. (206 aa)
degQUnannotated protein; Belongs to the peptidase S1C family. (463 aa)
mltDUnannotated protein. (478 aa)
dsbA_1Unannotated protein. (264 aa)
GCA_000236165_01429Unannotated protein. (607 aa)
GCA_000236165_01516Unannotated protein. (546 aa)
GCA_000236165_01549Unannotated protein. (185 aa)
htrAUnannotated protein. (357 aa)
macA_1Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (420 aa)
bepE_1Unannotated protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1029 aa)
GCA_000236165_01597Unannotated protein. (202 aa)
tolCUnannotated protein. (457 aa)
araCUnannotated protein. (248 aa)
GCA_000236165_01750Unannotated protein. (228 aa)
sugEUnannotated protein. (104 aa)
GCA_000236165_01833Unannotated protein. (139 aa)
plaUnannotated protein. (306 aa)
bepF_2Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (399 aa)
bepGUnannotated protein. (1062 aa)
dsbA_2Unannotated protein. (203 aa)
rlpA-2Unannotated protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (151 aa)
lpxA_2Unannotated protein; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (275 aa)
ppiBUnannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (163 aa)
amiCUnannotated protein. (481 aa)
GCA_000236165_02773Unannotated protein. (309 aa)
lgrDUnannotated protein. (1333 aa)
bepF_1Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (381 aa)
mdtE_2Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (382 aa)
bepE_2Unannotated protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1027 aa)
mexBUnannotated protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1002 aa)
mexAUnannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (350 aa)
GCA_000236165_02477Unannotated protein; Extracellular zinc metalloprotease. (549 aa)
lpxA_1Unannotated protein; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (256 aa)
GCA_000236165_02405Unannotated protein. (236 aa)
GCA_000236165_02357Unannotated protein. (581 aa)
GCA_000236165_02347Unannotated protein. (424 aa)
arnTUnannotated protein. (498 aa)
Your Current Organism:
Fluoribacter dumoffii
NCBI taxonomy Id: 1094715
Other names: F. dumoffii NY 23, Fluoribacter dumoffii ATCC 33279, Fluoribacter dumoffii NY 23, Fluoribacter dumoffii str. NY 23, Fluoribacter dumoffii strain NY 23
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