(10 nodes) Nucleotide-excision repair complex, and Protein poly-ADP-ribosylation network (Hyaloscypha bicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2J6SSF0	BRCT domain-containing protein. (473 aa)
	A0A2J6SVA4	MUS38-like protein. (938 aa)
	A0A2J6SY37	Uncharacterized protein. (396 aa)
	A0A2J6SZC5	DNA repair protein. (368 aa)
	A0A2J6T800	Uncharacterized protein. (192 aa)
	A0A2J6TFV8	Uncharacterized protein. (907 aa)
	A0A2J6TIE9	Rad4-domain-containing protein. (830 aa)
	A0A2J6TJW5	Poly [ADP-ribose] polymerase. (683 aa)
	A0A2J6TR37	Rad4-domain-containing protein. (800 aa)
	A0A2J6TUK9	UV excision repair protein Rad23. (391 aa)

Your Current Organism:

Hyaloscypha bicolor

NCBI taxonomy Id: 1095630
Other names: H. bicolor E, Hyaloscypha bicolor E

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2J6SSF0	A0A2J6SVA4	BRCT domain-containing protein.	MUS38-like protein.	0.645
A0A2J6SSF0	A0A2J6SY37	BRCT domain-containing protein.	Uncharacterized protein.	0.653
A0A2J6SSF0	A0A2J6SZC5	BRCT domain-containing protein.	DNA repair protein.	0.687
A0A2J6SSF0	A0A2J6T800	BRCT domain-containing protein.	Uncharacterized protein.	0.698
A0A2J6SSF0	A0A2J6TFV8	BRCT domain-containing protein.	Uncharacterized protein.	0.613
A0A2J6SSF0	A0A2J6TIE9	BRCT domain-containing protein.	Rad4-domain-containing protein.	0.736
A0A2J6SSF0	A0A2J6TR37	BRCT domain-containing protein.	Rad4-domain-containing protein.	0.736
A0A2J6SSF0	A0A2J6TUK9	BRCT domain-containing protein.	UV excision repair protein Rad23.	0.677
A0A2J6SVA4	A0A2J6SSF0	MUS38-like protein.	BRCT domain-containing protein.	0.645
A0A2J6SVA4	A0A2J6SY37	MUS38-like protein.	Uncharacterized protein.	0.999
A0A2J6SVA4	A0A2J6SZC5	MUS38-like protein.	DNA repair protein.	0.984
A0A2J6SVA4	A0A2J6TFV8	MUS38-like protein.	Uncharacterized protein.	0.896
A0A2J6SVA4	A0A2J6TIE9	MUS38-like protein.	Rad4-domain-containing protein.	0.530
A0A2J6SVA4	A0A2J6TJW5	MUS38-like protein.	Poly [ADP-ribose] polymerase.	0.658
A0A2J6SVA4	A0A2J6TR37	MUS38-like protein.	Rad4-domain-containing protein.	0.530
A0A2J6SVA4	A0A2J6TUK9	MUS38-like protein.	UV excision repair protein Rad23.	0.727
A0A2J6SY37	A0A2J6SSF0	Uncharacterized protein.	BRCT domain-containing protein.	0.653
A0A2J6SY37	A0A2J6SVA4	Uncharacterized protein.	MUS38-like protein.	0.999
A0A2J6SY37	A0A2J6SZC5	Uncharacterized protein.	DNA repair protein.	0.984
A0A2J6SY37	A0A2J6TFV8	Uncharacterized protein.	Uncharacterized protein.	0.860