(5 nodes) Phosphopantetheine binding network (Pseudonocardia sp. EC08061901)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALL84704.1	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1036 aa)
	ALL84705.1	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (916 aa)
	ALL85057.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (3538 aa)
	ALL83763.1	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2027 aa)
	ALL83768.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (3188 aa)

Your Current Organism:

Pseudonocardia sp. EC08061901

NCBI taxonomy Id: 1096856
Other names: P. sp. EC080619-01, Pseudonocardia sp. EC080619-01

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALL83763.1	ALL83768.1	AD017_25855	AD017_25885	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.940
ALL83763.1	ALL84704.1	AD017_25855	AD017_16230	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978
ALL83763.1	ALL84705.1	AD017_25855	AD017_16235	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.920
ALL83763.1	ALL85057.1	AD017_25855	AD017_25850	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
ALL83768.1	ALL83763.1	AD017_25885	AD017_25855	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.940
ALL83768.1	ALL84704.1	AD017_25885	AD017_16230	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ALL83768.1	ALL84705.1	AD017_25885	AD017_16235	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
ALL83768.1	ALL85057.1	AD017_25885	AD017_25850	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
ALL84704.1	ALL83763.1	AD017_16230	AD017_25855	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978
ALL84704.1	ALL83768.1	AD017_16230	AD017_25885	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ALL84704.1	ALL84705.1	AD017_16230	AD017_16235	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
ALL84704.1	ALL85057.1	AD017_16230	AD017_25850	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ALL84705.1	ALL83763.1	AD017_16235	AD017_25855	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.920
ALL84705.1	ALL83768.1	AD017_16235	AD017_25885	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
ALL84705.1	ALL84704.1	AD017_16235	AD017_16230	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
ALL84705.1	ALL85057.1	AD017_16235	AD017_25850	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
ALL85057.1	ALL83763.1	AD017_25850	AD017_25855	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
ALL85057.1	ALL83768.1	AD017_25850	AD017_25885	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
ALL85057.1	ALL84704.1	AD017_25850	AD017_16230	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ALL85057.1	ALL84705.1	AD017_25850	AD017_16235	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983