STRINGSTRING
dapF dapF ALL84348.1 ALL84348.1 ALL80983.1 ALL80983.1 ALL84401.1 ALL84401.1 ALL81111.1 ALL81111.1 ALL81178.1 ALL81178.1 ALL81316.1 ALL81316.1 dapD dapD ALL81333.1 ALL81333.1 aspA aspA ALL81414.1 ALL81414.1 ALL81482.1 ALL81482.1 asd asd ALL80845.1 ALL80845.1 ALL81691.1 ALL81691.1 ppc ppc aroQ aroQ ALL81759.1 ALL81759.1 ALL84540.1 ALL84540.1 ALL84310.1 ALL84310.1 dapA-3 dapA-3 dapA-2 dapA-2 dapA dapA ALL80427.1 ALL80427.1 ALL80387.1 ALL80387.1 mdh mdh ALL80137.1 ALL80137.1 ALL80124.1 ALL80124.1 ALL80035.1 ALL80035.1 ALL82595.1 ALL82595.1 aroA aroA ALL82675.1 ALL82675.1 lysA lysA lysA-2 lysA-2 ALL82951.1 ALL82951.1 gltD gltD ALL84879.1 ALL84879.1 dapA-4 dapA-4 ALL84962.1 ALL84962.1 ALL83443.1 ALL83443.1 ALL83492.1 ALL83492.1 ALL83538.1 ALL83538.1 ALL82561.1 ALL82561.1 aroC aroC aroK aroK ALL85066.1 ALL85066.1 ALL83896.1 ALL83896.1 ALL84036.1 ALL84036.1 aroE aroE ALL82207.1 ALL82207.1 ALL82154.1 ALL82154.1 ALL84662.1 ALL84662.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dapFHypothetical protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (286 aa)
ALL84348.1NAD-glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1588 aa)
ALL80983.1Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (421 aa)
ALL84401.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)
ALL81111.1Citrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (282 aa)
ALL81178.1citryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (276 aa)
ALL81316.1Succinyl-diaminopimelate desuccinylase; Catalyzes the formation of succinate and diaminoheptanedioate from succinyldiaminoheptanedioate; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
dapD2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA. (312 aa)
ALL81333.1Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). (356 aa)
aspAAspartate ammonia-lyase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (466 aa)
ALL81414.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (455 aa)
ALL81482.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)
asdAspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (359 aa)
ALL80845.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
ALL81691.1Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. (421 aa)
ppcPhosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (903 aa)
aroQ3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. (157 aa)
ALL81759.15-dehydro-4-deoxyglucarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family. (308 aa)
ALL84540.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
ALL84310.1Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. (234 aa)
dapA-3Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (342 aa)
dapA-2Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (309 aa)
dapADihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (304 aa)
ALL80427.1Phospho-2-dehydro-3-deoxyheptonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II DAHP synthase family. (468 aa)
ALL80387.1Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. (332 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. (328 aa)
ALL80137.1Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa)
ALL80124.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
ALL80035.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (1154 aa)
ALL82595.1N-acyl-L-amino acid amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
aroA3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (434 aa)
ALL82675.1Malate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
lysADiaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (484 aa)
lysA-2Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (443 aa)
ALL82951.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (296 aa)
gltDGlutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology. (483 aa)
ALL84879.1Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1516 aa)
dapA-4Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (292 aa)
ALL84962.1Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M20A family. (375 aa)
ALL83443.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
ALL83492.1Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the shikimate dehydrogenase family. (279 aa)
ALL83538.1Malate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)
ALL82561.1Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa)
aroCChorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (400 aa)
aroKShikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (229 aa)
ALL85066.1Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
ALL83896.1Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M20A family. (448 aa)
ALL84036.1Acetylornithine deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
aroEShikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (301 aa)
ALL82207.1Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)
ALL82154.1Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (122 aa)
ALL84662.1Dihydropteroate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
Your Current Organism:
Pseudonocardia sp. EC08061901
NCBI taxonomy Id: 1096856
Other names: P. sp. EC080619-01, Pseudonocardia sp. EC080619-01
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