STRINGSTRING
AGQ15296.1 AGQ15296.1 fbp_1-2 fbp_1-2 rlmB_2 rlmB_2 sigE sigE AGQ15300.1 AGQ15300.1 AGQ15301.1 AGQ15301.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGQ15296.1Hypothetical protein; Similar to gene ACICU_02838 in CP000863. (62 aa)
fbp_1-2Fructose-1,6-bisphosphatase; COG:COG0158; Belongs to the FBPase class 1 family. (323 aa)
rlmB_2rRNA methylase; COG:COG0566. (258 aa)
sigEDNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein; COG:COG1595; Belongs to the sigma-70 factor family. ECF subfamily. (204 aa)
AGQ15300.1Hypothetical protein; Similar to gene ACICU_02842 in CP000863. (106 aa)
AGQ15301.1Hypothetical protein; Similar to gene ACICU_02843 in CP000863. (129 aa)
Your Current Organism:
Acinetobacter baumannii BJAB07104
NCBI taxonomy Id: 1096995
Other names: A. baumannii BJAB07104, Acinetobacter baumannii str. BJAB07104, Acinetobacter baumannii strain BJAB07104
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