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cobU cobU dnaN dnaN ribF ribF Rph Rph galU galU ant(3'')-II ant(3'')-II tsaC tsaC dinB dinB AGQ12664.1 AGQ12664.1 rpoB rpoB rpoC rpoC AGQ12787.1 AGQ12787.1 holA holA AGQ13003.1 AGQ13003.1 AGQ13033.1 AGQ13033.1 AGQ13045.1 AGQ13045.1 AGQ13127.1 AGQ13127.1 dnaG dnaG coaD coaD AGQ13371.1 AGQ13371.1 cysD cysD cysN cysN dnaQ dnaQ AGQ13658.1 AGQ13658.1 AGQ13883.1 AGQ13883.1 AGQ13975.1 AGQ13975.1 AGQ13983.1 AGQ13983.1 cdsA cdsA ispD ispD cph2_4 cph2_4 AGQ14516.1 AGQ14516.1 kdsB kdsB AGQ14525.1 AGQ14525.1 AGQ14614.1 AGQ14614.1 AGQ14623.1 AGQ14623.1 AGQ14662.1 AGQ14662.1 AGQ14774.1 AGQ14774.1 cca cca AGQ15241.1 AGQ15241.1 AGQ15279.1 AGQ15279.1 AGQ15586.1 AGQ15586.1 glnE glnE AGQ15643.1 AGQ15643.1 rpoA rpoA AGQ15828.1 AGQ15828.1 AGQ15952.1 AGQ15952.1 ycdT ycdT glmU glmU
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cobUAdenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. (172 aa)
dnaNDNA polymerase sliding clamp subunit (PCNA-like protein); Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is re [...] (382 aa)
ribFFAD synthase; COG:COG0196; Belongs to the ribF family. (333 aa)
RphRNase PH; COG:COG0689. (238 aa)
galUUDP-glucose pyrophosphorylase; COG:COG1210. (291 aa)
ant(3'')-IIPutative nucleotidyltransferase; COG:COG1708. (262 aa)
tsaCPutative translation factor (SUA5); Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-)/CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate. (189 aa)
dinBNucleotidyltransferase/DNA polymerase involved in DNA repair; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (351 aa)
AGQ12664.1DNA polymerase III, chi subunit; COG:COG2927. (135 aa)
rpoBDNA-directed RNA polymerase, beta subunit/140 kD subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1362 aa)
rpoCDNA-directed RNA polymerase, beta' subunit/160 kD subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1397 aa)
AGQ12787.1Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); COG:COG1185. (697 aa)
holADNA polymerase III, delta subunit; COG:COG1466. (329 aa)
AGQ13003.1tRNA nucleotidyltransferase/poly(A) polymerase; COG:COG0617. (487 aa)
AGQ13033.1DNA polymerase I - 3'-5' exonuclease and polymerase domains; COG:COG0749. (923 aa)
AGQ13045.1DNA-directed RNA polymerase specialized sigma subunit, sigma54-like protein; COG:COG1508. (482 aa)
AGQ13127.1Response regulator containing a CheY-like receiver domain and a GGDEF domain; COG:COG3706. (473 aa)
dnaGDNA primase (bacterial type); RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. (621 aa)
coaDPhosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. (135 aa)
AGQ13371.1Nucleotidyltransferase/DNA polymerase involved in DNA repair; COG:COG0389. (155 aa)
cysDSulfate adenylyltransferase subunit 2; COG:COG0175. (302 aa)
cysNGTPases - Sulfate adenylate transferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (537 aa)
dnaQDNA polymerase III, epsilon subunit-related 3'-5' exonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (459 aa)
AGQ13658.1GGDEF domain protein; COG:COG2199. (420 aa)
AGQ13883.1Retron-type reverse transcriptase; COG:COG3344. (398 aa)
AGQ13975.1Nucleotidyltransferase/DNA polymerase involved in DNA repair; COG:COG0389. (442 aa)
AGQ13983.1Molybdopterin-guanine dinucleotide biosynthesis protein A; COG:COG0746. (189 aa)
cdsACDP-diglyceride synthetase; COG:COG0575; Belongs to the CDS family. (274 aa)
ispD4-diphosphocytidyl-2-methyl-D-erithritol synthase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). (238 aa)
cph2_4GGDEF domain protein; COG:COG2199. (409 aa)
AGQ14516.1ATPase involved in DNA replication; COG:COG0470. (311 aa)
kdsBCMP-2-keto-3-deoxyoctulosonic acid synthetase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (253 aa)
AGQ14525.1Nucleotidyl transferase; COG:COG1208. (229 aa)
AGQ14614.1UTP:GlnB (protein PII) uridylyltransferase; COG:COG2844; Belongs to the GlnD family. (887 aa)
AGQ14623.1DNA polymerase III, alpha subunit; COG:COG0587. (1187 aa)
AGQ14662.1Hypothetical protein; Similar to gene ACICU_01465 in CP000863. (200 aa)
AGQ14774.1DNA polymerase III, gamma/tau subunits; COG:COG2812. (688 aa)
ccatRNA nucleotidyltransferase/poly(A) polymerase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. (412 aa)
AGQ15241.1GGDEF domain protein; COG:COG2199. (478 aa)
AGQ15279.1Nicotinamide mononucleotide adenylyltransferase; COG:COG1056. (196 aa)
AGQ15586.1Hypothetical protein; COG:COG0397. (480 aa)
glnEGlutamine synthetase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transducti [...] (916 aa)
AGQ15643.1GGDEF domain protein; COG:COG2199. (366 aa)
rpoADNA-directed RNA polymerase, alpha subunit/40 kD subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (335 aa)
AGQ15828.1DNA-directed RNA polymerase, subunit K/omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (92 aa)
AGQ15952.1GGDEF domain protein; COG:COG2199. (568 aa)
ycdTGGDEF domain protein; COG:COG2199. (397 aa)
glmUGlucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (439 aa)
Your Current Organism:
Acinetobacter baumannii BJAB07104
NCBI taxonomy Id: 1096995
Other names: A. baumannii BJAB07104, Acinetobacter baumannii str. BJAB07104, Acinetobacter baumannii strain BJAB07104
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