STRINGSTRING
GAB35400.1 GAB35400.1 copB copB copA-2 copA-2 GAB35403.1 GAB35403.1 copZ copZ copA-3 copA-3 copZ-2 copZ-2 GAB36896.1 GAB36896.1 copB-2 copB-2 GAB36900.1 GAB36900.1 GAB36901.1 GAB36901.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GAB35400.1Hypothetical protein. (68 aa)
copBCopper-transporting ATPase CopB. (720 aa)
copA-2Copper-transporting ATPase CopA. (785 aa)
GAB35403.1Hypothetical protein. (319 aa)
copZCopper chaperone CopZ. (68 aa)
copA-3Copper-transporting ATPase CopA. (753 aa)
copZ-2Copper chaperone CopZ. (67 aa)
GAB36896.1Hypothetical protein. (115 aa)
copB-2Copper-transporting ATPase CopB. (662 aa)
GAB36900.1Putative major facilitator superfamily transporter. (441 aa)
GAB36901.1Putative ArsR family transcriptional regulator. (132 aa)
Your Current Organism:
Gordonia otitidis
NCBI taxonomy Id: 1108044
Other names: G. otitidis NBRC 100426, Gordonia otitidis IFM 10032, Gordonia otitidis NBRC 100426, Gordonia otitidis str. NBRC 100426, Gordonia otitidis strain NBRC 100426, Gordonia sp. IFM 10032
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