STRINGSTRING
GAB32954.1 GAB32954.1 copA copA ftsH ftsH smc smc GAB32667.1 GAB32667.1 uvrB uvrB GAB32758.1 GAB32758.1 GAB32759.1 GAB32759.1 uvrA uvrA GAB32855.1 GAB32855.1 arc arc GAB33091.1 GAB33091.1 uvrD2 uvrD2 GAB33241.1 GAB33241.1 GAB33266.1 GAB33266.1 GAB33299.1 GAB33299.1 GAB33315.1 GAB33315.1 GAB33528.1 GAB33528.1 GAB33808.1 GAB33808.1 GAB33860.1 GAB33860.1 GAB33985.1 GAB33985.1 paaJ paaJ GAB34113.1 GAB34113.1 htpG htpG GAB34145.1 GAB34145.1 GAB34322.1 GAB34322.1 GAB34323.1 GAB34323.1 lon lon GAB34413.1 GAB34413.1 uvrD1 uvrD1 GAB34469.1 GAB34469.1 kdpB kdpB clpB clpB clpB-2 clpB-2 GAB34717.1 GAB34717.1 recG recG GAB34757.1 GAB34757.1 GAB34818.1 GAB34818.1 GAB34862.1 GAB34862.1 GAB35036.1 GAB35036.1 ruvA ruvA ruvB ruvB GAB35151.1 GAB35151.1 uvrD uvrD parA parA copB copB copA-2 copA-2 GAB35716.1 GAB35716.1 GAB35920.1 GAB35920.1 clpC clpC GAB35977.1 GAB35977.1 GAB36005.1 GAB36005.1 GAB36009.1 GAB36009.1 GAB36033.1 GAB36033.1 ychF ychF clpC-2 clpC-2 GAB36140.1 GAB36140.1 recG-2 recG-2 GAB36232.1 GAB36232.1 GAB36249.1 GAB36249.1 dnaB dnaB GAB36393.1 GAB36393.1 clpX clpX smc-2 smc-2 GAB36539.1 GAB36539.1 GAB36607.1 GAB36607.1 uvrD2-2 uvrD2-2 dnaB-2 dnaB-2 copA-3 copA-3 copB-2 copB-2 GAB36995.1 GAB36995.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GAB32954.1Hypothetical protein. (380 aa)
copACopper-transporting ATPase CopA. (796 aa)
ftsHATP-dependent protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (814 aa)
smcChromosome partition protein SMC. (627 aa)
GAB32667.1Hypothetical protein. (102 aa)
uvrBUvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] (720 aa)
GAB32758.1Hypothetical protein. (739 aa)
GAB32759.1Hypothetical protein. (771 aa)
uvrAUvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (956 aa)
GAB32855.1Hypothetical protein. (255 aa)
arcATPase ARC; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. (598 aa)
GAB33091.1Hypothetical protein. (539 aa)
uvrD2ATP-dependent DNA helicase UvrD2. (557 aa)
GAB33241.1Hypothetical protein. (575 aa)
GAB33266.1Hypothetical protein. (401 aa)
GAB33299.1Hypothetical protein. (357 aa)
GAB33315.1Putative helicase. (803 aa)
GAB33528.1Putative anion-transporting ATPase. (381 aa)
GAB33808.1Putative magnesium-transporting P-type ATPase. (877 aa)
GAB33860.1Mrp family protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (381 aa)
GAB33985.1Hypothetical protein. (287 aa)
paaJphenylacetate-CoA oxygenase subunit PaaJ. (168 aa)
GAB34113.1Hypothetical protein. (686 aa)
htpGChaperone protein HtpG; Molecular chaperone. Has ATPase activity. (683 aa)
GAB34145.1Putative magnesium chelatase subunit. (682 aa)
GAB34322.1Putative anion-transporting ATPase. (347 aa)
GAB34323.1Putative anion-transporting ATPase. (368 aa)
lonATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (780 aa)
GAB34413.1Putative cation-transport ATPase. (898 aa)
uvrD1ATP-dependent DNA helicase UvrD1. (844 aa)
GAB34469.1Putative UvrABC system protein A. (849 aa)
kdpBPotassium-transporting ATPase B chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily. (724 aa)
clpBChaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (850 aa)
clpB-2Chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (876 aa)
GAB34717.1Putative ATPase. (371 aa)
recGATP-dependent DNA helicase RecG. (760 aa)
GAB34757.1Hypothetical protein. (311 aa)
GAB34818.1Putative cation-transporting ATPase. (843 aa)
GAB34862.1Hypothetical protein. (551 aa)
GAB35036.1Hypothetical protein. (420 aa)
ruvAHolliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (197 aa)
ruvBHolliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (360 aa)
GAB35151.1Putative ATPase. (439 aa)
uvrDATP-dependent DNA helicase UvrD. (748 aa)
parAChromosome partitioning protein ParA. (324 aa)
copBCopper-transporting ATPase CopB. (720 aa)
copA-2Copper-transporting ATPase CopA. (785 aa)
GAB35716.1Putative ATPase. (535 aa)
GAB35920.1Hypothetical protein. (349 aa)
clpCATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family. (848 aa)
GAB35977.1Putative ATPase; Belongs to the AAA ATPase family. (777 aa)
GAB36005.1Putative cadmium-transporting ATPase. (654 aa)
GAB36009.1Hypothetical protein. (113 aa)
GAB36033.1Putative ATPase. (333 aa)
ychFPutative GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (359 aa)
clpC-2ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family. (848 aa)
GAB36140.1Hypothetical protein. (139 aa)
recG-2ATP-dependent DNA helicase RecG. (828 aa)
GAB36232.1Hypothetical protein. (338 aa)
GAB36249.1Hypothetical protein. (125 aa)
dnaBReplicative DNA helicase. (490 aa)
GAB36393.1Putative ABC transporter ATP-binding protein. (558 aa)
clpXATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (426 aa)
smc-2Chromosome partition protein SMC. (599 aa)
GAB36539.1Putative ATPase. (420 aa)
GAB36607.1Hypothetical protein. (375 aa)
uvrD2-2ATP-dependent DNA helicase UvrD2. (711 aa)
dnaB-2Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (744 aa)
copA-3Copper-transporting ATPase CopA. (753 aa)
copB-2Copper-transporting ATPase CopB. (662 aa)
GAB36995.1Hypothetical protein. (154 aa)
Your Current Organism:
Gordonia otitidis
NCBI taxonomy Id: 1108044
Other names: G. otitidis NBRC 100426, Gordonia otitidis IFM 10032, Gordonia otitidis NBRC 100426, Gordonia otitidis str. NBRC 100426, Gordonia otitidis strain NBRC 100426, Gordonia sp. IFM 10032
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.