Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GAB33685.1 | ctaC | GOOTI_077_00060 | GOOTI_065_01150 | Putative oxidoreductase. | Cytochrome c oxidase subunit II. | 0.503 |
| GAB33685.1 | ctaD | GOOTI_077_00060 | GOOTI_222_00100 | Putative oxidoreductase. | Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.484 |
| GAB33685.1 | ctaE | GOOTI_077_00060 | GOOTI_065_01220 | Putative oxidoreductase. | Cytochrome c oxidase subunit III. | 0.503 |
| GAB33685.1 | cydA | GOOTI_077_00060 | GOOTI_192_00060 | Putative oxidoreductase. | Cytochrome bd-type menaquinol oxidase subunit I. | 0.513 |
| GAB33685.1 | cydB | GOOTI_077_00060 | GOOTI_192_00050 | Putative oxidoreductase. | Cytochrome bd-type menaquinol oxidase subunit II. | 0.499 |
| GAB33685.1 | qcrA | GOOTI_077_00060 | GOOTI_065_01200 | Putative oxidoreductase. | Menaquinol-cytochrome c reductase iron-sulfur protein. | 0.565 |
| GAB33685.1 | qcrB | GOOTI_077_00060 | GOOTI_065_01190 | Putative oxidoreductase. | Menaquinol-cytochrome c reductase cytochrome b subunit. | 0.498 |
| GAB33808.1 | atpA | GOOTI_082_00380 | GOOTI_227_00190 | Putative magnesium-transporting P-type ATPase. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.637 |
| GAB33808.1 | atpB | GOOTI_082_00380 | GOOTI_227_00230 | Putative magnesium-transporting P-type ATPase. | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.602 |
| GAB33808.1 | atpC | GOOTI_082_00380 | GOOTI_227_00160 | Putative magnesium-transporting P-type ATPase. | ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.596 |
| GAB33808.1 | atpD | GOOTI_082_00380 | GOOTI_227_00170 | Putative magnesium-transporting P-type ATPase. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.692 |
| GAB33808.1 | atpE | GOOTI_082_00380 | GOOTI_227_00220 | Putative magnesium-transporting P-type ATPase. | ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.629 |
| GAB33808.1 | atpF/atpH | GOOTI_082_00380 | GOOTI_227_00200 | Putative magnesium-transporting P-type ATPase. | ATP synthase subunit b/ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.727 |
| GAB33808.1 | atpG | GOOTI_082_00380 | GOOTI_227_00180 | Putative magnesium-transporting P-type ATPase. | ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.649 |
| GAB33808.1 | ppa | GOOTI_082_00380 | GOOTI_012_00390 | Putative magnesium-transporting P-type ATPase. | Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. | 0.621 |
| GAB34413.1 | atpA | GOOTI_108_00050 | GOOTI_227_00190 | Putative cation-transport ATPase. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.637 |
| GAB34413.1 | atpB | GOOTI_108_00050 | GOOTI_227_00230 | Putative cation-transport ATPase. | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.602 |
| GAB34413.1 | atpC | GOOTI_108_00050 | GOOTI_227_00160 | Putative cation-transport ATPase. | ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.596 |
| GAB34413.1 | atpD | GOOTI_108_00050 | GOOTI_227_00170 | Putative cation-transport ATPase. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.692 |
| GAB34413.1 | atpE | GOOTI_108_00050 | GOOTI_227_00220 | Putative cation-transport ATPase. | ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.629 |
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