5 items (Serendipita indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PIIN_00744	Probable CRM1-nuclear export factor, exportin. (1070 aa)
	PIIN_01467	Probable ran GTPase activating protein 1. (424 aa)
	PIIN_04914	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (216 aa)
	PIIN_06011	Uncharacterized protein. (521 aa)
	PIIN_07311	Uncharacterized protein. (1714 aa)

Your Current Organism:

Serendipita indica

NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PIIN_00744	PIIN_01467	G4T6I6	G4T8J0	Probable CRM1-nuclear export factor, exportin.	Probable ran GTPase activating protein 1.	0.888
PIIN_00744	PIIN_04914	G4T6I6	G4TI38	Probable CRM1-nuclear export factor, exportin.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.994
PIIN_00744	PIIN_06011	G4T6I6	G4TL75	Probable CRM1-nuclear export factor, exportin.	Uncharacterized protein.	0.993
PIIN_00744	PIIN_07311	G4T6I6	G4TPW0	Probable CRM1-nuclear export factor, exportin.	Uncharacterized protein.	0.994
PIIN_01467	PIIN_00744	G4T8J0	G4T6I6	Probable ran GTPase activating protein 1.	Probable CRM1-nuclear export factor, exportin.	0.888
PIIN_01467	PIIN_04914	G4T8J0	G4TI38	Probable ran GTPase activating protein 1.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.999
PIIN_01467	PIIN_06011	G4T8J0	G4TL75	Probable ran GTPase activating protein 1.	Uncharacterized protein.	0.999
PIIN_01467	PIIN_07311	G4T8J0	G4TPW0	Probable ran GTPase activating protein 1.	Uncharacterized protein.	0.782
PIIN_04914	PIIN_00744	G4TI38	G4T6I6	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Probable CRM1-nuclear export factor, exportin.	0.994
PIIN_04914	PIIN_01467	G4TI38	G4T8J0	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Probable ran GTPase activating protein 1.	0.999
PIIN_04914	PIIN_06011	G4TI38	G4TL75	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Uncharacterized protein.	0.999
PIIN_04914	PIIN_07311	G4TI38	G4TPW0	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Uncharacterized protein.	0.955
PIIN_06011	PIIN_00744	G4TL75	G4T6I6	Uncharacterized protein.	Probable CRM1-nuclear export factor, exportin.	0.993
PIIN_06011	PIIN_01467	G4TL75	G4T8J0	Uncharacterized protein.	Probable ran GTPase activating protein 1.	0.999
PIIN_06011	PIIN_04914	G4TL75	G4TI38	Uncharacterized protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.999
PIIN_06011	PIIN_07311	G4TL75	G4TPW0	Uncharacterized protein.	Uncharacterized protein.	0.997
PIIN_07311	PIIN_00744	G4TPW0	G4T6I6	Uncharacterized protein.	Probable CRM1-nuclear export factor, exportin.	0.994
PIIN_07311	PIIN_01467	G4TPW0	G4T8J0	Uncharacterized protein.	Probable ran GTPase activating protein 1.	0.782
PIIN_07311	PIIN_04914	G4TPW0	G4TI38	Uncharacterized protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.955
PIIN_07311	PIIN_06011	G4TPW0	G4TL75	Uncharacterized protein.	Uncharacterized protein.	0.997