STRINGSTRING
PIIN_00265 PIIN_00265 PIIN_00564 PIIN_00564 PIIN_01069 PIIN_01069 PIIN_01483 PIIN_01483 PIIN_02455 PIIN_02455 PIIN_02460 PIIN_02460 PIIN_02592 PIIN_02592 PIIN_03177 PIIN_03177 PIIN_03328 PIIN_03328 PIIN_05963 PIIN_05963 PIIN_06426 PIIN_06426 PIIN_07316 PIIN_07316 PIIN_07839 PIIN_07839 PIIN_08148 PIIN_08148 PIIN_08677 PIIN_08677
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_00265Related to COP9-signalosome complex subunit 4. (451 aa)
PIIN_00564DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (655 aa)
PIIN_01069WD_REPEATS_REGION domain-containing protein. (471 aa)
PIIN_01483CPSF_A domain-containing protein. (1145 aa)
PIIN_02455Related to cullin 4A; Belongs to the cullin family. (658 aa)
PIIN_02460Related to ACOB protein. (293 aa)
PIIN_02592Probable COP9 signalosome complex subunit 2. (467 aa)
PIIN_03177Related to COP9 signalosome complex subunit 6. (340 aa)
PIIN_03328WD_REPEATS_REGION domain-containing protein. (592 aa)
PIIN_05963Probable COP9 signalosome subunit 5 CSN5. (369 aa)
PIIN_06426Uncharacterized protein. (332 aa)
PIIN_07316WD_REPEATS_REGION domain-containing protein. (603 aa)
PIIN_07839Related to COP9 signalosome complex subunit 1. (477 aa)
PIIN_08148Uncharacterized protein. (425 aa)
PIIN_08677PCI domain-containing protein. (428 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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