(45 nodes) Proteasome network (Serendipita indica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PIIN_00075	Uncharacterized protein. (262 aa)
	PIIN_11703	Ubiquitin carboxyl-terminal hydrolase. (542 aa)
	PIIN_00577	Proteasome subunit beta. (178 aa)
	PIIN_00609	RPN13_C domain-containing protein. (290 aa)
	PIIN_11674	Proteasome endopeptidase complex. (249 aa)
	PIIN_11768	Probable 26s proteasome p44.5 protein. (440 aa)
	PIIN_01810	Probable RPN7-subunit of the regulatory particle of the proteasome. (412 aa)
	PIIN_02050	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (990 aa)
	PIIN_02151	Probable 20S proteasome beta2 subunit. (273 aa)
	PIIN_02132	Proteasome subunit alpha type. (262 aa)
	PIIN_02269	Proteasome subunit alpha type. (251 aa)
	PIIN_02278	Proteasome subunit alpha type. (277 aa)
	PIIN_02319	Proteasome subunit beta. (298 aa)
	PIIN_02414	Uncharacterized protein. (524 aa)
	PIIN_02417	Probable RPN5-26S proteasome regulatory subunit. (481 aa)
	PIIN_02418	Proteasome subunit beta. (223 aa)
	PIIN_02510	Related to YTA7-26S proteasome subunit. (1426 aa)
	PIIN_02666	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (262 aa)
	PIIN_02696	Uncharacterized protein. (350 aa)
	PIIN_02692	Uncharacterized protein. (1879 aa)
	PIIN_03123	Probable RPT3-26S proteasome regulatory subunit; Belongs to the AAA ATPase family. (445 aa)
	PIIN_03182	Uncharacterized protein. (1852 aa)
	PIIN_03284	Probable RPT6-26S proteasome regulatory subunit; Belongs to the AAA ATPase family. (523 aa)
	PIIN_03812	Proteasome subunit beta; Belongs to the peptidase T1B family. (266 aa)
	PIIN_04546	Uncharacterized protein. (348 aa)
	PIIN_04731	Proteasome subunit beta. (250 aa)
	PIIN_05150	Probable 26S proteasome non-ATPase regulatory subunit p58. (544 aa)
	PIIN_05232	Related to 26S proteasome regulatory particle chain RPN9. (382 aa)
	PIIN_05291	Proteasome subunit beta. (205 aa)
	PIIN_05526	Uncharacterized protein. (373 aa)
	PIIN_05735	Proteasome subunit alpha type. (283 aa)
	PIIN_05762	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (912 aa)
	PIIN_06313	Probable RPT1-26S proteasome regulatory subunit; Belongs to the AAA ATPase family. (454 aa)
	PIIN_06459	Probable RPT5-26S proteasome regulatory subunit; Belongs to the AAA ATPase family. (458 aa)
	PIIN_06682	UCH_1 domain-containing protein. (418 aa)
	PIIN_06761	Proteasome subunit alpha type. (249 aa)
	PIIN_07364	Probable RPN11-26S proteasome regulatory subunit. (297 aa)
	PIIN_07375	Probable 26S proteasome regulatory subunit Rpn10. (378 aa)
	PIIN_07413	Uncharacterized protein. (132 aa)
	PIIN_07415	Uncharacterized protein. (279 aa)
	PIIN_07635	Related to 26S proteasome-associated ubiquitin carboxyl-terminal hydrolase. (324 aa)
	PIIN_07912	Probable RPN8-26S proteasome regulatory subunit. (325 aa)
	PIIN_08403	Probable RPT4-26S proteasome regulatory subunit; Belongs to the AAA ATPase family. (389 aa)
	PIIN_08975	Probable 26S proteasome non-atpase regulatory subunit 8. (261 aa)
	PIIN_09200	Probable RPT2-26S proteasome regulatory subunit; Belongs to the AAA ATPase family. (418 aa)

Your Current Organism:

Serendipita indica

NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PIIN_00075	PIIN_00577	G4T533	G4T6A5	Uncharacterized protein.	Proteasome subunit beta.	0.947
PIIN_00075	PIIN_00609	G4T533	G4T6B8	Uncharacterized protein.	RPN13_C domain-containing protein.	0.944
PIIN_00075	PIIN_01810	G4T533	G4T9D1	Uncharacterized protein.	Probable RPN7-subunit of the regulatory particle of the proteasome.	0.965
PIIN_00075	PIIN_02050	G4T533	G4TA54	Uncharacterized protein.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.953
PIIN_00075	PIIN_02132	G4T533	G4TAE1	Uncharacterized protein.	Proteasome subunit alpha type.	0.958
PIIN_00075	PIIN_02151	G4T533	G4TAD3	Uncharacterized protein.	Probable 20S proteasome beta2 subunit.	0.919
PIIN_00075	PIIN_02269	G4T533	G4TAR2	Uncharacterized protein.	Proteasome subunit alpha type.	0.934
PIIN_00075	PIIN_02278	G4T533	G4TAT5	Uncharacterized protein.	Proteasome subunit alpha type.	0.930
PIIN_00075	PIIN_02319	G4T533	G4TAX1	Uncharacterized protein.	Proteasome subunit beta.	0.912
PIIN_00075	PIIN_02414	G4T533	G4TB50	Uncharacterized protein.	Uncharacterized protein.	0.931
PIIN_00075	PIIN_02417	G4T533	G4TB70	Uncharacterized protein.	Probable RPN5-26S proteasome regulatory subunit.	0.931
PIIN_00075	PIIN_02418	G4T533	G4TB71	Uncharacterized protein.	Proteasome subunit beta.	0.933
PIIN_00075	PIIN_02510	G4T533	G4TBH0	Uncharacterized protein.	Related to YTA7-26S proteasome subunit.	0.829
PIIN_00075	PIIN_02666	G4T533	G4TBW6	Uncharacterized protein.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.941
PIIN_00075	PIIN_02692	G4T533	G4TC06	Uncharacterized protein.	Uncharacterized protein.	0.625
PIIN_00075	PIIN_02696	G4T533	G4TBY4	Uncharacterized protein.	Uncharacterized protein.	0.625
PIIN_00075	PIIN_03123	G4T533	G4TD50	Uncharacterized protein.	Probable RPT3-26S proteasome regulatory subunit; Belongs to the AAA ATPase family.	0.972
PIIN_00075	PIIN_03182	G4T533	G4TD96	Uncharacterized protein.	Uncharacterized protein.	0.625
PIIN_00075	PIIN_03284	G4T533	G4TDJ1	Uncharacterized protein.	Probable RPT6-26S proteasome regulatory subunit; Belongs to the AAA ATPase family.	0.966
PIIN_00075	PIIN_03812	G4T533	G4TEZ7	Uncharacterized protein.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.922