STRINGSTRING
PIIN_00629 PIIN_00629 PIIN_02747 PIIN_02747 PIIN_04103 PIIN_04103 PIIN_04709 PIIN_04709 PIIN_04825 PIIN_04825 PIIN_05011 PIIN_05011 SLX1 SLX1 PIIN_05828 PIIN_05828 PIIN_06323 PIIN_06323 PIIN_06335 PIIN_06335 PIIN_06685 PIIN_06685 PIIN_06794 PIIN_06794 PIIN_01729 PIIN_01729
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_00629Related to nuclear transport factor. (121 aa)
PIIN_02747DUF1767 domain-containing protein. (391 aa)
PIIN_04103Related to probable RNA helicase MPH1. (1197 aa)
PIIN_04709Related to RAD2-structure-specific nuclease of the nucleotide excision repairosome. (1153 aa)
PIIN_04825Probable DED81-asparaginyl-tRNA-synthetase. (576 aa)
PIIN_05011DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (632 aa)
SLX1Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (428 aa)
PIIN_05828Related to DNA repair protein RAD14. (354 aa)
PIIN_06323Related to QDE-3 QDE3 protein (Involved in gene silencing). (627 aa)
PIIN_06335Uncharacterized protein. (94 aa)
PIIN_06685Related to dna excision repair protein ercc-1. (247 aa)
PIIN_06794Related to RAD1-component of the nucleotide excision repairosome. (921 aa)
PIIN_01729Uncharacterized protein. (992 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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