44 items (Serendipita indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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co-expression

protein homology

Your Input:
	PIIN_00010	Probable IMP4-component of the U3 small nucleolar ribonucleoprotein. (288 aa)
	PIIN_00160	BP28CT domain-containing protein. (1961 aa)
	PIIN_00213	RRM domain-containing protein. (328 aa)
	PIIN_00736	Related to LCP5-U3 small nucleolar ribonucleoprotein involved in maturation of 18S rRNA. (365 aa)
	PIIN_01163	Related to NOC4-ribosome biogenesis protein. (564 aa)
	PIIN_01213	U3 small nucleolar RNA-associated protein 22. (1221 aa)
	PIIN_01299	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (627 aa)
	PIIN_01336	Probable NOP1-fibrillarin. (309 aa)
	PIIN_02064	annotation not available (760 aa)
	PIIN_02255	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
	PIIN_02358	Related to EMG1-Protein required for ribosome biogenesis. (348 aa)
	PIIN_02398	Related to RRP5-processing of pre-ribosomal RNA. (1501 aa)
	PIIN_02675	WD_REPEATS_REGION domain-containing protein. (591 aa)
	PIIN_03557	Related to RRP9-protein associated with the U3 small nucleolar RNA. (560 aa)
	PIIN_03596	Related to S. pombe beta-transducin. (955 aa)
	PIIN_03751	Uncharacterized protein. (967 aa)
	NAT10	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1111 aa)
	PIIN_04008	Related to UTP6-U3 snoRNP protein. (654 aa)
	PIIN_04245	Fcf2 domain-containing protein. (265 aa)
	PIIN_04537	Related to DIP2-Dom34p-interacting protein. (912 aa)
	PIIN_04754	Related to ECM16-putative DEAH-box RNA helicase. (1200 aa)
	PIIN_05180	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (350 aa)
	PIIN_05181	Probable NOP58-required for pre-18S rRNA processing. (587 aa)
	PIIN_05653	Probable periodic tryptophan protein PWP2. (909 aa)
	PIIN_05939	Related to UTP4-U3 snoRNP protein. (806 aa)
	PIIN_06083	Related to RCL1-RNA terminal phosphate cyclase-like protein. (355 aa)
	PIIN_06111	DRIM domain-containing protein. (2573 aa)
	PIIN_06695	annotation not available (196 aa)
	PIIN_07272	Probable BMS1-GTP-binding protein, required for distinct steps of 40S ribosome biogenesis. (901 aa)
	PIIN_07583	Related to UTP13-U3 snoRNP protein. (837 aa)
	PIIN_07761	Probable IMP3-component of the U3 small nucleolar ribonucleoprotein. (182 aa)
	PIIN_07907	Related to Pwp2p. (524 aa)
	PIIN_08145	Probable SIK1-involved in pre-rRNA processing. (526 aa)
	PIIN_08416	Related to UTP7-U3 snoRNP protein. (623 aa)
	PIIN_08452	Uncharacterized protein. (915 aa)
	PIIN_08475	Uncharacterized protein. (463 aa)
	PIIN_09052	Related to UTP18-Possible U3 snoRNP protein involved in maturation of pre-18S rRNA. (542 aa)
	PIIN_09425	Probable ATP dependent RNA helicase. (705 aa)
	PIIN_09618	Related to NOP14-nuclear and nucleolar protein with possible role in ribosome biogenesis. (221 aa)
	PIIN_09880	WD_REPEATS_REGION domain-containing protein. (240 aa)
	PIIN_09905	Related to cgi-94 protein. (319 aa)
	PIIN_10320	Related to NOP14-nuclear and nucleolar protein with possible role in ribosome biogenesis. (684 aa)
	PIIN_10771	Sof1 domain-containing protein. (61 aa)
	PIIN_11501	Related to MPP10-component of the U3 small nucleolar ribonucleoprotein. (202 aa)

Your Current Organism:

Serendipita indica

NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NAT10	PIIN_00010	G4TFH1	G4T500	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Probable IMP4-component of the U3 small nucleolar ribonucleoprotein.	0.995
NAT10	PIIN_00160	G4TFH1	G4T5A5	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	BP28CT domain-containing protein.	0.995
NAT10	PIIN_00213	G4TFH1	G4T5D6	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	RRM domain-containing protein.	0.990
NAT10	PIIN_00736	G4TFH1	G4T6H8	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Related to LCP5-U3 small nucleolar ribonucleoprotein involved in maturation of 18S rRNA.	0.989
NAT10	PIIN_01163	G4TFH1	G4T7M4	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Related to NOC4-ribosome biogenesis protein.	0.995
NAT10	PIIN_01213	G4TFH1	G4T7W1	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	U3 small nucleolar RNA-associated protein 22.	0.998
NAT10	PIIN_01299	G4TFH1	G4T809	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	0.967
NAT10	PIIN_01336	G4TFH1	G4T888	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Probable NOP1-fibrillarin.	0.991
NAT10	PIIN_02064	G4TFH1	G4TA39	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	annotation not available	0.998
NAT10	PIIN_02255	G4TFH1	G4TAN1	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.970
NAT10	PIIN_02358	G4TFH1	G4TB19	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Related to EMG1-Protein required for ribosome biogenesis.	0.975
NAT10	PIIN_02398	G4TFH1	G4TB41	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Related to RRP5-processing of pre-ribosomal RNA.	0.996
NAT10	PIIN_02675	G4TFH1	G4TBX0	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	WD_REPEATS_REGION domain-containing protein.	0.975
NAT10	PIIN_03557	G4TFH1	G4TE88	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Related to RRP9-protein associated with the U3 small nucleolar RNA.	0.993
NAT10	PIIN_03596	G4TFH1	G4TED4	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Related to S. pombe beta-transducin.	0.997
NAT10	PIIN_03751	G4TFH1	G4TES0	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Uncharacterized protein.	0.990
NAT10	PIIN_04008	G4TFH1	G4TFI7	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Related to UTP6-U3 snoRNP protein.	0.982
NAT10	PIIN_04245	G4TFH1	G4TG65	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Fcf2 domain-containing protein.	0.965
NAT10	PIIN_04537	G4TFH1	G4TH25	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Related to DIP2-Dom34p-interacting protein.	0.992
NAT10	PIIN_04754	G4TFH1	G4THM6	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Related to ECM16-putative DEAH-box RNA helicase.	0.961