STRINGSTRING
PIIN_00044 PIIN_00044 PIIN_00293 PIIN_00293 TIF6 TIF6 PIIN_00372 PIIN_00372 PIIN_00440 PIIN_00440 PIIN_00427 PIIN_00427 PIIN_00460 PIIN_00460 PIIN_00606 PIIN_00606 PIIN_00729 PIIN_00729 PIIN_00831 PIIN_00831 PIIN_00885 PIIN_00885 PIIN_01032 PIIN_01032 PIIN_01117 PIIN_01117 PIIN_01226 PIIN_01226 PIIN_01228 PIIN_01228 PIIN_01281 PIIN_01281 PIIN_01284 PIIN_01284 PIIN_01260 PIIN_01260 PIIN_11757 PIIN_11757 PIIN_01330 PIIN_01330 PIIN_11758 PIIN_11758 PIIN_01440 PIIN_01440 PIIN_01509 PIIN_01509 PIIN_01705 PIIN_01705 PIIN_01695 PIIN_01695 PIIN_01888 PIIN_01888 PIIN_02182 PIIN_02182 PIIN_02608 PIIN_02608 PIIN_02612 PIIN_02612 PIIN_02745 PIIN_02745 PIIN_03034 PIIN_03034 PIIN_03066 PIIN_03066 PIIN_03115 PIIN_03115 PIIN_03135 PIIN_03135 PIIN_03162 PIIN_03162 PIIN_03224 PIIN_03224 ERB1 ERB1 PIIN_03613 PIIN_03613 PIIN_03749 PIIN_03749 PIIN_04149 PIIN_04149 PIIN_04246 PIIN_04246 PIIN_04309 PIIN_04309 PIIN_04295 PIIN_04295 PIIN_04759 PIIN_04759 PIIN_04892 PIIN_04892 PIIN_04907 PIIN_04907 PIIN_05172 PIIN_05172 PIIN_05488 PIIN_05488 PIIN_06143 PIIN_06143 SPB1 SPB1 PIIN_06771 PIIN_06771 PIIN_06897 PIIN_06897 PIIN_07022 PIIN_07022 PIIN_07174 PIIN_07174 PIIN_07179 PIIN_07179 PIIN_07393 PIIN_07393 PIIN_07581 PIIN_07581 PIIN_07854 PIIN_07854 PIIN_08100 PIIN_08100 PIIN_09343 PIIN_09343 PIIN_09508 PIIN_09508 PIIN_09725 PIIN_09725 PIIN_11802 PIIN_11802 PIIN_10226 PIIN_10226 PIIN_10573 PIIN_10573 PIIN_11353 PIIN_11353 PIIN_02980 PIIN_02980 PIIN_03443 PIIN_03443 PIIN_11712 PIIN_11712 PIIN_00691 PIIN_00691
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_00044C2H2-type domain-containing protein. (473 aa)
PIIN_00293RIX1 domain-containing protein. (719 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (245 aa)
PIIN_00372Uncharacterized protein. (707 aa)
PIIN_00440Related to RNA helicase. (689 aa)
PIIN_00427Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (278 aa)
PIIN_00460Protein MAK16; Belongs to the MAK16 family. (325 aa)
PIIN_00606Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4811 aa)
PIIN_00729RNA helicase. (641 aa)
PIIN_00831Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (757 aa)
PIIN_00885Related to NOP15-protein involved in 60S ribosomal subunit biogenesis. (360 aa)
PIIN_01032Related to SSF1-nucleolar protein involved in the assembly of the large ribosomal subunit. (404 aa)
PIIN_01117Uncharacterized protein. (121 aa)
PIIN_01226PUM-HD domain-containing protein. (653 aa)
PIIN_01228Uncharacterized protein. (388 aa)
PIIN_01281Uncharacterized protein. (586 aa)
PIIN_01284Related to MNR2-Manganese resistance protein. (739 aa)
PIIN_01260annotation not available (272 aa)
PIIN_11757Uncharacterized protein. (205 aa)
PIIN_01330Related to RLP24-Ribosomal Like Protein 24, part of a pre-60S complex. (210 aa)
PIIN_11758Probable LSG1-Large-Subunit GTPase involved in 60S ribosomal subunit biogenesis. (650 aa)
PIIN_01440Uncharacterized protein. (612 aa)
PIIN_01509Ipi1_N domain-containing protein. (721 aa)
PIIN_01705Related to MAK5-ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (703 aa)
PIIN_0169560S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
PIIN_01888Related to RRB1-involved in the regulation of ribosome biosynthesis. (533 aa)
PIIN_02182RNA helicase. (793 aa)
PIIN_02608Related to MAK11 protein (Maintenance of killer toxin-encoding satellite M1 dsRNA). (433 aa)
PIIN_02612Related to WD-repeat protein crb3. (477 aa)
PIIN_02745Related to curved dna-binding protein. (402 aa)
PIIN_03034Uncharacterized protein. (236 aa)
PIIN_03066Related to DRS1-RNA helicase of the DEAD box family; Belongs to the DEAD box helicase family. (767 aa)
PIIN_03115Uncharacterized protein. (446 aa)
PIIN_03135Probable NOP2-nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (683 aa)
PIIN_03162Related to DNA polymerase V. (1180 aa)
PIIN_03224Related to NOC2-Crucial for intranuclear movement of ribosomal particles. (725 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (757 aa)
PIIN_03613Related to BRX1-Essential nucleolar protein required for biogenesis of the 60S ribosomal subunit. (319 aa)
PIIN_03749Related to GTP-binding protein. (688 aa)
PIIN_04149Related to protein RPF2 involved in ribosomal large subunit assembly and maintenance. (356 aa)
PIIN_04246Related to microtubule binding protein YTM1-Laccaria bicolor. (215 aa)
PIIN_04309Probable RNA-binding protein. (799 aa)
PIIN_0429560S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (570 aa)
PIIN_04759Related to EBP2-required for pre-rRNA processing and ribosomal subunit assembly. (390 aa)
PIIN_04892Uncharacterized protein. (484 aa)
PIIN_04907RRM domain-containing protein. (627 aa)
PIIN_05172Uncharacterized protein. (648 aa)
PIIN_05488DUF2470 domain-containing protein. (225 aa)
PIIN_06143annotation not available (511 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (1111 aa)
PIIN_06771Uncharacterized protein. (539 aa)
PIIN_06897Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (435 aa)
PIIN_07022ATP-dependent RNA helicase DBP10. (955 aa)
PIIN_07174Probable NSA2-involved in biogenesis of ribosomal large subunit. (219 aa)
PIIN_07179Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (666 aa)
PIIN_07393Related to NUG1-Nuclear GTPase (Involved in Ribosome biogenesis). (548 aa)
PIIN_07581Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (550 aa)
PIIN_07854Related to DBP3-Putative RNA helicase required for pre-rRNA processing; Belongs to the DEAD box helicase family. (556 aa)
PIIN_08100Related to RRP1-involved in processing rRNA species to mature rRNAs. (263 aa)
PIIN_09343annotation not available (702 aa)
PIIN_09508Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (258 aa)
PIIN_09725Uncharacterized protein. (775 aa)
PIIN_11802Related to pescadillo development protein. (452 aa)
PIIN_10226Related to Nucleolar protein NOP4. (850 aa)
PIIN_10573Related to WD repeat protein PWP1. (481 aa)
PIIN_11353C2H2-type domain-containing protein. (125 aa)
PIIN_02980Related to MAK21-protein required for 60S ribosomal subunit biogenesis. (1037 aa)
PIIN_03443Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (787 aa)
PIIN_11712Related to RPF1-involved in the assembly of the large ribosomal subunit. (347 aa)
PIIN_00691RNA helicase. (559 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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