STRINGSTRING
PIIN_00372 PIIN_00372 PIIN_00440 PIIN_00440 PIIN_00460 PIIN_00460 PIIN_00729 PIIN_00729 PIIN_00885 PIIN_00885 PIIN_01032 PIIN_01032 PIIN_01117 PIIN_01117 PIIN_01226 PIIN_01226 PIIN_01228 PIIN_01228 PIIN_01284 PIIN_01284 PIIN_11757 PIIN_11757 PIIN_01330 PIIN_01330 PIIN_01440 PIIN_01440 PIIN_01705 PIIN_01705 PIIN_01695 PIIN_01695 PIIN_01888 PIIN_01888 PIIN_02182 PIIN_02182 PIIN_03034 PIIN_03034 PIIN_03066 PIIN_03066 PIIN_03115 PIIN_03115 PIIN_03135 PIIN_03135 PIIN_03224 PIIN_03224 ERB1 ERB1 PIIN_03613 PIIN_03613 PIIN_03749 PIIN_03749 PIIN_04149 PIIN_04149 PIIN_04246 PIIN_04246 PIIN_04759 PIIN_04759 PIIN_04892 PIIN_04892 PIIN_04907 PIIN_04907 PIIN_05172 PIIN_05172 PIIN_05488 PIIN_05488 SPB1 SPB1 PIIN_06771 PIIN_06771 PIIN_06897 PIIN_06897 PIIN_07174 PIIN_07174 PIIN_07179 PIIN_07179 PIIN_07393 PIIN_07393 PIIN_07581 PIIN_07581 PIIN_07854 PIIN_07854 PIIN_08100 PIIN_08100 PIIN_09343 PIIN_09343 PIIN_09508 PIIN_09508 PIIN_11802 PIIN_11802 PIIN_10226 PIIN_10226 PIIN_10573 PIIN_10573 PIIN_02980 PIIN_02980 PIIN_03443 PIIN_03443 PIIN_11712 PIIN_11712 PIIN_00691 PIIN_00691
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_00372Uncharacterized protein. (707 aa)
PIIN_00440Related to RNA helicase. (689 aa)
PIIN_00460Protein MAK16; Belongs to the MAK16 family. (325 aa)
PIIN_00729RNA helicase. (641 aa)
PIIN_00885Related to NOP15-protein involved in 60S ribosomal subunit biogenesis. (360 aa)
PIIN_01032Related to SSF1-nucleolar protein involved in the assembly of the large ribosomal subunit. (404 aa)
PIIN_01117Uncharacterized protein. (121 aa)
PIIN_01226PUM-HD domain-containing protein. (653 aa)
PIIN_01228Uncharacterized protein. (388 aa)
PIIN_01284Related to MNR2-Manganese resistance protein. (739 aa)
PIIN_11757Uncharacterized protein. (205 aa)
PIIN_01330Related to RLP24-Ribosomal Like Protein 24, part of a pre-60S complex. (210 aa)
PIIN_01440Uncharacterized protein. (612 aa)
PIIN_01705Related to MAK5-ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (703 aa)
PIIN_0169560S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
PIIN_01888Related to RRB1-involved in the regulation of ribosome biosynthesis. (533 aa)
PIIN_02182RNA helicase. (793 aa)
PIIN_03034Uncharacterized protein. (236 aa)
PIIN_03066Related to DRS1-RNA helicase of the DEAD box family; Belongs to the DEAD box helicase family. (767 aa)
PIIN_03115Uncharacterized protein. (446 aa)
PIIN_03135Probable NOP2-nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (683 aa)
PIIN_03224Related to NOC2-Crucial for intranuclear movement of ribosomal particles. (725 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (757 aa)
PIIN_03613Related to BRX1-Essential nucleolar protein required for biogenesis of the 60S ribosomal subunit. (319 aa)
PIIN_03749Related to GTP-binding protein. (688 aa)
PIIN_04149Related to protein RPF2 involved in ribosomal large subunit assembly and maintenance. (356 aa)
PIIN_04246Related to microtubule binding protein YTM1-Laccaria bicolor. (215 aa)
PIIN_04759Related to EBP2-required for pre-rRNA processing and ribosomal subunit assembly. (390 aa)
PIIN_04892Uncharacterized protein. (484 aa)
PIIN_04907RRM domain-containing protein. (627 aa)
PIIN_05172Uncharacterized protein. (648 aa)
PIIN_05488DUF2470 domain-containing protein. (225 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (1111 aa)
PIIN_06771Uncharacterized protein. (539 aa)
PIIN_06897Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (435 aa)
PIIN_07174Probable NSA2-involved in biogenesis of ribosomal large subunit. (219 aa)
PIIN_07179Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (666 aa)
PIIN_07393Related to NUG1-Nuclear GTPase (Involved in Ribosome biogenesis). (548 aa)
PIIN_07581Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (550 aa)
PIIN_07854Related to DBP3-Putative RNA helicase required for pre-rRNA processing; Belongs to the DEAD box helicase family. (556 aa)
PIIN_08100Related to RRP1-involved in processing rRNA species to mature rRNAs. (263 aa)
PIIN_09343annotation not available (702 aa)
PIIN_09508Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (258 aa)
PIIN_11802Related to pescadillo development protein. (452 aa)
PIIN_10226Related to Nucleolar protein NOP4. (850 aa)
PIIN_10573Related to WD repeat protein PWP1. (481 aa)
PIIN_02980Related to MAK21-protein required for 60S ribosomal subunit biogenesis. (1037 aa)
PIIN_03443Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (787 aa)
PIIN_11712Related to RPF1-involved in the assembly of the large ribosomal subunit. (347 aa)
PIIN_00691RNA helicase. (559 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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