STRINGSTRING
PIIN_00885 PIIN_00885 PIIN_01440 PIIN_01440 ERB1 ERB1 PIIN_04246 PIIN_04246 PIIN_04759 PIIN_04759 PIIN_11802 PIIN_11802 PIIN_00691 PIIN_00691
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_00885Related to NOP15-protein involved in 60S ribosomal subunit biogenesis. (360 aa)
PIIN_01440Uncharacterized protein. (612 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (757 aa)
PIIN_04246Related to microtubule binding protein YTM1-Laccaria bicolor. (215 aa)
PIIN_04759Related to EBP2-required for pre-rRNA processing and ribosomal subunit assembly. (390 aa)
PIIN_11802Related to pescadillo development protein. (452 aa)
PIIN_00691RNA helicase. (559 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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