STRINGSTRING
PIIN_02602 PIIN_02602 PIIN_02714 PIIN_02714 PIIN_11851 PIIN_11851 PIIN_04186 PIIN_04186 PIIN_05178 PIIN_05178 PIIN_07288 PIIN_07288 PIIN_09443 PIIN_09443 PIIN_09799 PIIN_09799 PIIN_10793 PIIN_10793 PIIN_11111 PIIN_11111 PIIN_09844 PIIN_09844
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_02602Related to LTV1-low-temperature viability protein. (533 aa)
PIIN_02714Probable PNO1 protein. (317 aa)
PIIN_11851Probable BUD23-Protein involved in bud-site selection. (283 aa)
PIIN_0418620S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (439 aa)
PIIN_05178Related to ENP1-required for pre-rRNA processing and 40S ribosomal subunit synthesis. (463 aa)
PIIN_07288Probable casein kinase-1 hhp1; Belongs to the protein kinase superfamily. (409 aa)
PIIN_09443Related to TSR1-protein involved in 20S rRNA accumulation. (673 aa)
PIIN_09799Related to RIO Kinase 1. (678 aa)
PIIN_10793Related to TSR1-protein involved in 20S rRNA accumulation. (372 aa)
PIIN_11111Related to TSR1-protein involved in 20S rRNA accumulation. (157 aa)
PIIN_09844Related to RIO2 protein. (460 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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