STRINGSTRING
PIIN_00021 PIIN_00021 PIIN_00022 PIIN_00022 PIIN_00752 PIIN_00752 PIIN_01659 PIIN_01659 PIIN_02028 PIIN_02028 PIIN_02244 PIIN_02244 PIIN_02289 PIIN_02289 PIIN_02290 PIIN_02290 PIIN_02332 PIIN_02332 PIIN_02331 PIIN_02331 PIIN_04097 PIIN_04097 PIIN_05523 PIIN_05523 PIIN_06803 PIIN_06803 PIIN_07310 PIIN_07310 PIIN_11874 PIIN_11874 PIIN_07699 PIIN_07699 PIIN_08693 PIIN_08693 PIIN_09912 PIIN_09912
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_00021Related to NMD2-Nonsense-mediated mRNA decay protein 2. (710 aa)
PIIN_00022Upf2 domain-containing protein. (205 aa)
PIIN_00752Probable eukaryotic translational release factor 1. (438 aa)
PIIN_01659AAA_12 domain-containing protein. (1485 aa)
PIIN_02028Related to MTQ2-Putative S-adenosylmethionine-dependent methyltransferase. (155 aa)
PIIN_02244Smg4_UPF3 domain-containing protein. (107 aa)
PIIN_02289RNA-dependent RNA polymerase. (678 aa)
PIIN_02290Related to NAM7-nonsense-mediated mRNA decay protein (RdRP). (1022 aa)
PIIN_02332Probable NAM7-nonsense-mediated mRNA decay protein, ATP-dependent RNA helicase. (278 aa)
PIIN_02331Probable NAM7-nonsense-mediated mRNA decay protein, ATP-dependent RNA helicase. (170 aa)
PIIN_04097Probable SUP35-eukaryotic peptide chain release factor GTP-binding subunit. (684 aa)
PIIN_05523PINc domain-containing protein. (1138 aa)
PIIN_06803Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (853 aa)
PIIN_07310Uncharacterized protein. (862 aa)
PIIN_11874PWI domain-containing protein. (347 aa)
PIIN_07699Related to regulator of nonsense transcripts 1. (850 aa)
PIIN_08693Related to TRM112-subunit of an adoMet-dependent tRNA methyltransferase (MTase) complex. (124 aa)
PIIN_09912Uncharacterized protein. (930 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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