STRINGSTRING
PIIN_00160 PIIN_00160 PIIN_00780 PIIN_00780 PIIN_00736 PIIN_00736 PIIN_01163 PIIN_01163 PIIN_01654 PIIN_01654 PIIN_02064 PIIN_02064 PIIN_02367 PIIN_02367 PIIN_02398 PIIN_02398 PIIN_02675 PIIN_02675 PIIN_02714 PIIN_02714 PIIN_03054 PIIN_03054 PIIN_03498 PIIN_03498 PIIN_04008 PIIN_04008 PIIN_06458 PIIN_06458 PIIN_03557 PIIN_03557 PIIN_11851 PIIN_11851 PIIN_05939 PIIN_05939 PIIN_04245 PIIN_04245 PIIN_04271 PIIN_04271 PIIN_04537 PIIN_04537 PIIN_04754 PIIN_04754 PIIN_07060 PIIN_07060 PIIN_06695 PIIN_06695 PIIN_07272 PIIN_07272 PIIN_07362 PIIN_07362 PIIN_07583 PIIN_07583 PIIN_04868 PIIN_04868 PIIN_05178 PIIN_05178 PIIN_05180 PIIN_05180 PIIN_07600 PIIN_07600 PIIN_07907 PIIN_07907 PIIN_08186 PIIN_08186 PIIN_08416 PIIN_08416 PIIN_08452 PIIN_08452 PIIN_08475 PIIN_08475 PIIN_08754 PIIN_08754 PIIN_08860 PIIN_08860 PIIN_09425 PIIN_09425 PIIN_09443 PIIN_09443 PIIN_09555 PIIN_09555 PIIN_09880 PIIN_09880 PIIN_09901 PIIN_09901 PIIN_10442 PIIN_10442 PIIN_10578 PIIN_10578 PIIN_10771 PIIN_10771 PIIN_10793 PIIN_10793 PIIN_11110 PIIN_11110 PIIN_11111 PIIN_11111 PIIN_09844 PIIN_09844 PIIN_05653 PIIN_05653
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_00160BP28CT domain-containing protein. (1961 aa)
PIIN_00780Uncharacterized protein. (69 aa)
PIIN_00736Related to LCP5-U3 small nucleolar ribonucleoprotein involved in maturation of 18S rRNA. (365 aa)
PIIN_01163Related to NOC4-ribosome biogenesis protein. (564 aa)
PIIN_01654Related to SAS10-involved in silencing. (677 aa)
PIIN_02064annotation not available (760 aa)
PIIN_02367Uncharacterized protein. (333 aa)
PIIN_02398Related to RRP5-processing of pre-ribosomal RNA. (1501 aa)
PIIN_02675WD_REPEATS_REGION domain-containing protein. (591 aa)
PIIN_02714Probable PNO1 protein. (317 aa)
PIIN_03054Related to TSR2-Twenty S rRNA accumulation protein. (197 aa)
PIIN_03498Uncharacterized protein. (745 aa)
PIIN_04008Related to UTP6-U3 snoRNP protein. (654 aa)
PIIN_06458Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation. (186 aa)
PIIN_03557Related to RRP9-protein associated with the U3 small nucleolar RNA. (560 aa)
PIIN_11851Probable BUD23-Protein involved in bud-site selection. (283 aa)
PIIN_05939Related to UTP4-U3 snoRNP protein. (806 aa)
PIIN_04245Fcf2 domain-containing protein. (265 aa)
PIIN_04271Kri1_C domain-containing protein. (690 aa)
PIIN_04537Related to DIP2-Dom34p-interacting protein. (912 aa)
PIIN_04754Related to ECM16-putative DEAH-box RNA helicase. (1200 aa)
PIIN_07060Related to SOF1-involved in 18S pre-rRNA production. (475 aa)
PIIN_06695annotation not available (196 aa)
PIIN_07272Probable BMS1-GTP-binding protein, required for distinct steps of 40S ribosome biogenesis. (901 aa)
PIIN_07362Probable DEAD box protein (Putative RNA helicase); Belongs to the DEAD box helicase family. (458 aa)
PIIN_07583Related to UTP13-U3 snoRNP protein. (837 aa)
PIIN_04868Uncharacterized protein. (312 aa)
PIIN_05178Related to ENP1-required for pre-rRNA processing and 40S ribosomal subunit synthesis. (463 aa)
PIIN_05180KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (350 aa)
PIIN_07600Related to ESF2-Eighteen S rRNA processing Factor. (204 aa)
PIIN_07907Related to Pwp2p. (524 aa)
PIIN_08186Uncharacterized protein. (243 aa)
PIIN_08416Related to UTP7-U3 snoRNP protein. (623 aa)
PIIN_08452Uncharacterized protein. (915 aa)
PIIN_08475Uncharacterized protein. (463 aa)
PIIN_08754rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (330 aa)
PIIN_08860Probable 40s ribosomal protein S13.e; Belongs to the universal ribosomal protein uS15 family. (166 aa)
PIIN_09425Probable ATP dependent RNA helicase. (705 aa)
PIIN_09443Related to TSR1-protein involved in 20S rRNA accumulation. (673 aa)
PIIN_09555Probable 40S Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (92 aa)
PIIN_09880WD_REPEATS_REGION domain-containing protein. (240 aa)
PIIN_0990140S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (133 aa)
PIIN_10442Related to CRP-2 40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
PIIN_10578WD_REPEATS_REGION domain-containing protein. (158 aa)
PIIN_10771Sof1 domain-containing protein. (61 aa)
PIIN_10793Related to TSR1-protein involved in 20S rRNA accumulation. (372 aa)
PIIN_11110Probable RPS8A-ribosomal protein S8.e. (121 aa)
PIIN_11111Related to TSR1-protein involved in 20S rRNA accumulation. (157 aa)
PIIN_09844Related to RIO2 protein. (460 aa)
PIIN_05653Probable periodic tryptophan protein PWP2. (909 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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