STRINGSTRING
PIIN_07583 PIIN_07583 PIIN_08416 PIIN_08416 PIIN_07600 PIIN_07600 PIIN_01163 PIIN_01163 PIIN_02398 PIIN_02398 PIIN_03557 PIIN_03557 PIIN_10578 PIIN_10578 PIIN_04245 PIIN_04245 PIIN_08452 PIIN_08452 PIIN_04537 PIIN_04537 PIIN_07272 PIIN_07272
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_07583Related to UTP13-U3 snoRNP protein. (837 aa)
PIIN_08416Related to UTP7-U3 snoRNP protein. (623 aa)
PIIN_07600Related to ESF2-Eighteen S rRNA processing Factor. (204 aa)
PIIN_01163Related to NOC4-ribosome biogenesis protein. (564 aa)
PIIN_02398Related to RRP5-processing of pre-ribosomal RNA. (1501 aa)
PIIN_03557Related to RRP9-protein associated with the U3 small nucleolar RNA. (560 aa)
PIIN_10578WD_REPEATS_REGION domain-containing protein. (158 aa)
PIIN_04245Fcf2 domain-containing protein. (265 aa)
PIIN_08452Uncharacterized protein. (915 aa)
PIIN_04537Related to DIP2-Dom34p-interacting protein. (912 aa)
PIIN_07272Probable BMS1-GTP-binding protein, required for distinct steps of 40S ribosome biogenesis. (901 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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