STRINGSTRING
PIIN_03401 PIIN_03401 PIIN_03188 PIIN_03188 PIIN_02430 PIIN_02430 PIIN_11761 PIIN_11761 PIIN_01554 PIIN_01554 TSR3 TSR3 PIIN_00961 PIIN_00961 PIIN_00417 PIIN_00417 PIIN_00303 PIIN_00303 PIIN_00222 PIIN_00222 PIIN_08434 PIIN_08434 PIIN_08401 PIIN_08401 PIIN_08069 PIIN_08069 PIIN_05092 PIIN_05092 PIIN_03452 PIIN_03452 PIIN_11285 PIIN_11285 PIIN_08877 PIIN_08877 PIIN_03190 PIIN_03190
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_03401Related to DEG1-pseudouridine synthase. (423 aa)
PIIN_03188Uncharacterized protein. (236 aa)
PIIN_02430Uncharacterized protein. (136 aa)
PIIN_11761Uncharacterized protein. (577 aa)
PIIN_01554Uncharacterized protein. (213 aa)
TSR3Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family. (281 aa)
PIIN_00961SAS4 domain-containing protein. (547 aa)
PIIN_00417Related to DRAP deaminase RIB2. (510 aa)
PIIN_00303Related to PUS7-pseudouridine synthase. (812 aa)
PIIN_00222Probable NOP10-nucleolar rRNA processing protein. (61 aa)
PIIN_08434Probable CBF5-Centromere Binding Factor / putative rRNA pseuduridine synthase. (532 aa)
PIIN_08401Related to PUS1-pseudouridine synthase 1. (581 aa)
PIIN_08069H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (280 aa)
PIIN_05092Related to tRNA pseudouridine synthase B. (389 aa)
PIIN_03452PseudoU_synth_2 domain-containing protein. (359 aa)
PIIN_11285Related to CAX4-required for full levels of dolichol-linked oligosaccharides. (177 aa)
PIIN_08877Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (191 aa)
PIIN_03190Uncharacterized protein. (214 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.