STRINGSTRING
PIIN_00089 PIIN_00089 PIIN_05928 PIIN_05928 PIIN_05729 PIIN_05729 PIIN_06083 PIIN_06083 PIIN_05584 PIIN_05584 PIIN_05523 PIIN_05523 PIIN_11783 PIIN_11783 PIIN_04464 PIIN_04464 PIIN_04247 PIIN_04247 PIIN_04186 PIIN_04186 PIIN_03894 PIIN_03894 PIIN_03690 PIIN_03690 PIIN_03616 PIIN_03616 PIIN_03556 PIIN_03556 PIIN_03372 PIIN_03372 PIIN_02947 PIIN_02947 PIIN_02669 PIIN_02669 PIIN_02585 PIIN_02585 PIIN_02501 PIIN_02501 PIIN_02408 PIIN_02408 PIIN_02406 PIIN_02406 PIIN_02405 PIIN_02405 PIIN_02433 PIIN_02433 PIIN_02251 PIIN_02251 PIIN_01645 PIIN_01645 PIIN_01596 PIIN_01596 PIIN_00102 PIIN_00102 PIIN_00261 PIIN_00261 PIIN_00375 PIIN_00375 PIIN_11715 PIIN_11715 PIIN_00635 PIIN_00635 PIIN_00617 PIIN_00617 PIIN_00732 PIIN_00732 PIIN_00749 PIIN_00749 PIIN_00738 PIIN_00738 PIIN_00879 PIIN_00879 PIIN_01006 PIIN_01006 PIIN_01585 PIIN_01585 PIIN_00081 PIIN_00081 PIIN_00072 PIIN_00072 PIIN_06534 PIIN_06534 PIIN_06695 PIIN_06695 PIIN_06698 PIIN_06698 PIIN_06810 PIIN_06810 PIIN_06814 PIIN_06814 PIIN_06872 PIIN_06872 PIIN_06938 PIIN_06938 PIIN_07913 PIIN_07913 PIIN_08607 PIIN_08607 PIIN_09183 PIIN_09183 PIIN_09184 PIIN_09184 PIIN_09229 PIIN_09229 PIIN_09432 PIIN_09432 PIIN_10436 PIIN_10436 PIIN_11896 PIIN_11896 PIIN_10590 PIIN_10590 PIIN_10784 PIIN_10784 PIIN_03414 PIIN_03414
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_00089Uncharacterized protein. (329 aa)
PIIN_05928Related to QDE-2 post-transcriptional gene silencing protein QDE-2. (793 aa)
PIIN_05729Related to CCR4-component of the major cytoplasmic deadenylase (C-terminal). (618 aa)
PIIN_06083Related to RCL1-RNA terminal phosphate cyclase-like protein. (355 aa)
PIIN_05584Related to YSH1-component of pre-mRNA polyadenylation factor PF I. (756 aa)
PIIN_05523PINc domain-containing protein. (1138 aa)
PIIN_11783Related to ribonuclease H1. (448 aa)
PIIN_04464Related to ribonuclease H1, putative-Talaromyces stipitatus. (281 aa)
PIIN_04247Related to tRNA-splicing endonuclease. (427 aa)
PIIN_0418620S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (439 aa)
PIIN_03894PINc domain-containing protein. (376 aa)
PIIN_03690Related to QDE-2 post-transcriptional gene silencing protein QDE-2; Belongs to the argonaute family. (980 aa)
PIIN_03616Related to Ribonuclease P protein subunit p30. (325 aa)
PIIN_035563'-5' exonuclease domain-containing protein. (433 aa)
PIIN_03372RNB domain-containing protein. (872 aa)
PIIN_02947DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1466 aa)
PIIN_02669Uncharacterized protein. (1466 aa)
PIIN_02585Related to ribonucleases; Belongs to the RNase T2 family. (412 aa)
PIIN_02501Uncharacterized protein. (131 aa)
PIIN_02408Uncharacterized protein. (450 aa)
PIIN_02406Uncharacterized protein. (527 aa)
PIIN_02405Uncharacterized protein. (286 aa)
PIIN_02433Endo/exonuclease/phosphatase domain-containing protein. (260 aa)
PIIN_02251Related to IRE1-protein kinase. (1152 aa)
PIIN_01645Uncharacterized protein. (739 aa)
PIIN_01596Related to ribonuclease H. (656 aa)
PIIN_00102Related to endonuclease/exonuclease/phosphatase family protein-Penicillium marneffei. (296 aa)
PIIN_00261Related to argonaute-like protein-Laccaria bicolor; Belongs to the argonaute family. (926 aa)
PIIN_003755'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1438 aa)
PIIN_11715Related to lariat-debranching enzyme. (528 aa)
PIIN_00635Exonuclease domain-containing protein. (301 aa)
PIIN_00617Uncharacterized protein. (274 aa)
PIIN_00732Related to TRZ1-tRNase Z, involved in RNA processing. (795 aa)
PIIN_00749tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] (292 aa)
PIIN_00738Related to PAN2-component of Pab1p-stimulated poly(A) ribonuclease. (1054 aa)
PIIN_00879Uncharacterized protein. (218 aa)
PIIN_01006Endonuclease. (335 aa)
PIIN_01585Uncharacterized protein. (470 aa)
PIIN_00081Piwi domain-containing protein. (867 aa)
PIIN_00072Related to REX2-Oligoribonuclease, mitochondrial. (243 aa)
PIIN_06534Related to exonuclease, RNase T and DNA polymerase III-Flavobacterium johnsoniae. (221 aa)
PIIN_06695annotation not available (196 aa)
PIIN_06698Uncharacterized protein. (377 aa)
PIIN_06810Uncharacterized protein. (525 aa)
PIIN_06814Probable DIS3 3`-5` exoribonuclease required for 3` end formation of 5.8S rRNA; Belongs to the RNR ribonuclease family. (1006 aa)
PIIN_06872Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (379 aa)
PIIN_06938Uncharacterized protein. (191 aa)
PIIN_07913RNase III domain-containing protein. (106 aa)
PIIN_08607Related to MRPL3-Mitochondrial ribosomal protein, large subunit. (475 aa)
PIIN_09183RNase III domain-containing protein. (144 aa)
PIIN_09184Uncharacterized protein. (435 aa)
PIIN_09229Related to nucleolar 100K polymyositis-scleroderma protein. (847 aa)
PIIN_09432Related to Ribonuclease Z / related to thiamin pyrophosphokinase 1. (321 aa)
PIIN_10436RNase H domain-containing protein. (107 aa)
PIIN_11896Uncharacterized protein. (82 aa)
PIIN_10590Related to tRNA splicing endonuclease beta subunit. (386 aa)
PIIN_10784Probable CCR4-NOT transcription complex, subunit 7. (371 aa)
PIIN_03414Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1418 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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