(8 nodes) L-amino acid transport network (Serendipita indica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PIIN_06100	Probable YMC1-Protein of the mitochondrial carrier family (MCF); Belongs to the mitochondrial carrier (TC 2.A.29) family. (311 aa)
	PIIN_05763	Probable mitochondrial amino acid transporter ARG-13; Belongs to the mitochondrial carrier (TC 2.A.29) family. (335 aa)
	PIIN_01726	Related to AVT3-Vacuolar transporter, involved in amino acid efflux from the vacuole. (776 aa)
	PIIN_07727	Related to Carrier protein YMC1, mitochondrial; Belongs to the mitochondrial carrier (TC 2.A.29) family. (294 aa)
	PIIN_00991	Probable mitochondrial carrier protein ARALAR1; Belongs to the mitochondrial carrier (TC 2.A.29) family. (701 aa)
	PIIN_01424	Related to amino acid vacuolar transport protein AVT2. (562 aa)
	PIIN_04687	Related to carnitine/acyl carnitine carrier, putative-Cryptococcus neoformans; Belongs to the mitochondrial carrier (TC 2.A.29) family. (290 aa)
	PIIN_05189	Probable AVT6-involved in amino acid efflux from the vacuole. (457 aa)

Your Current Organism:

Serendipita indica

NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PIIN_01424	PIIN_01726	G4T8D6	G4U391	Related to amino acid vacuolar transport protein AVT2.	Related to AVT3-Vacuolar transporter, involved in amino acid efflux from the vacuole.	0.408
PIIN_01726	PIIN_01424	G4U391	G4T8D6	Related to AVT3-Vacuolar transporter, involved in amino acid efflux from the vacuole.	Related to amino acid vacuolar transport protein AVT2.	0.408
PIIN_01726	PIIN_05189	G4U391	G4TIV7	Related to AVT3-Vacuolar transporter, involved in amino acid efflux from the vacuole.	Probable AVT6-involved in amino acid efflux from the vacuole.	0.455
PIIN_05189	PIIN_01726	G4TIV7	G4U391	Probable AVT6-involved in amino acid efflux from the vacuole.	Related to AVT3-Vacuolar transporter, involved in amino acid efflux from the vacuole.	0.455