STRINGSTRING
PIIN_02785 PIIN_02785 PIIN_06938 PIIN_06938 PIIN_05986 PIIN_05986 PIIN_10670 PIIN_10670 PIIN_09533 PIIN_09533 PIIN_09304 PIIN_09304 PIIN_09229 PIIN_09229 PIIN_09184 PIIN_09184 PIIN_09183 PIIN_09183 PIIN_08877 PIIN_08877 PIIN_08434 PIIN_08434 PIIN_08069 PIIN_08069 PIIN_07486 PIIN_07486 PIIN_03698 PIIN_03698 PIIN_04875 PIIN_04875 PIIN_02603 PIIN_02603 PIIN_02408 PIIN_02408 PIIN_02406 PIIN_02406 PIIN_02405 PIIN_02405 PIIN_01711 PIIN_01711 PIIN_01596 PIIN_01596 PIIN_01549 PIIN_01549 PIIN_00342 PIIN_00342 PIIN_00303 PIIN_00303 PIIN_00514 PIIN_00514 PIIN_07036 PIIN_07036
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_02785RNase_PH domain-containing protein. (333 aa)
PIIN_06938Uncharacterized protein. (191 aa)
PIIN_05986Bin3-type SAM domain-containing protein. (316 aa)
PIIN_10670Uncharacterized protein. (229 aa)
PIIN_09533Related to RRP40-protein involved in ribosomal RNA processing, component of the exosome complex. (230 aa)
PIIN_09304CCHC-type domain-containing protein. (303 aa)
PIIN_09229Related to nucleolar 100K polymyositis-scleroderma protein. (847 aa)
PIIN_09184Uncharacterized protein. (435 aa)
PIIN_09183RNase III domain-containing protein. (144 aa)
PIIN_08877Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (191 aa)
PIIN_08434Probable CBF5-Centromere Binding Factor / putative rRNA pseuduridine synthase. (532 aa)
PIIN_08069H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (280 aa)
PIIN_07486RNase_PH domain-containing protein. (244 aa)
PIIN_03698Probable RRP45-Exosome complex exonuclease. (313 aa)
PIIN_04875Related to Exosome complex exonuclease RRP43. (279 aa)
PIIN_02603Uncharacterized protein. (291 aa)
PIIN_02408Uncharacterized protein. (450 aa)
PIIN_02406Uncharacterized protein. (527 aa)
PIIN_02405Uncharacterized protein. (286 aa)
PIIN_01711Related to RRP4-3`-5` exoribonuclease. (311 aa)
PIIN_01596Related to ribonuclease H. (656 aa)
PIIN_01549Probable PRP16-RNA-dependent ATPase. (1235 aa)
PIIN_00342Probable exosome complex exonuclease rrp41. (277 aa)
PIIN_00303Related to PUS7-pseudouridine synthase. (812 aa)
PIIN_00514Uncharacterized protein. (82 aa)
PIIN_07036RNase_PH domain-containing protein. (267 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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