STRINGSTRING
PIIN_00606 PIIN_00606 PIIN_01032 PIIN_01032 PIIN_01226 PIIN_01226 PIIN_01228 PIIN_01228 PIIN_01284 PIIN_01284 PIIN_01290 PIIN_01290 PIIN_01330 PIIN_01330 PIIN_11758 PIIN_11758 PIIN_01408 PIIN_01408 PIIN_01440 PIIN_01440 PIIN_01598 PIIN_01598 PIIN_01597 PIIN_01597 PIIN_01635 PIIN_01635 PIIN_01695 PIIN_01695 PIIN_01833 PIIN_01833 PIIN_01907 PIIN_01907 PIIN_02150 PIIN_02150 PIIN_02173 PIIN_02173 PIIN_02255 PIIN_02255 PIIN_02252 PIIN_02252 PIIN_02398 PIIN_02398 PIIN_02720 PIIN_02720 PIIN_03034 PIIN_03034 PIIN_03066 PIIN_03066 PIIN_03115 PIIN_03115 PIIN_03135 PIIN_03135 PIIN_03224 PIIN_03224 ERB1 ERB1 PIIN_03613 PIIN_03613 PIIN_04149 PIIN_04149 PIIN_04246 PIIN_04246 PIIN_04534 PIIN_04534 PIIN_04750 PIIN_04750 PIIN_04759 PIIN_04759 PIIN_00460 PIIN_00460 PIIN_00372 PIIN_00372 TIF6 TIF6 PIIN_05517 PIIN_05517 PIIN_05179 PIIN_05179 PIIN_05172 PIIN_05172 PIIN_05111 PIIN_05111 PIIN_05032 PIIN_05032 PIIN_04892 PIIN_04892 PIIN_04778 PIIN_04778 PIIN_00307 PIIN_00307 PIIN_00236 PIIN_00236 PIIN_00044 PIIN_00044 PIIN_00914 PIIN_00914 PIIN_00885 PIIN_00885 PIIN_00831 PIIN_00831 PIIN_00729 PIIN_00729 PIIN_06897 PIIN_06897 PIIN_06728 PIIN_06728 PIIN_06663 PIIN_06663 PIIN_06394 PIIN_06394 PIIN_06387 PIIN_06387 SPB1 SPB1 PIIN_06143 PIIN_06143 PIIN_05488 PIIN_05488 PIIN_01756 PIIN_01756 PIIN_00691 PIIN_00691 PIIN_11712 PIIN_11712 PIIN_02955 PIIN_02955 PIIN_10226 PIIN_10226 PIIN_11802 PIIN_11802 PIIN_09629 PIIN_09629 PIIN_09589 PIIN_09589 PIIN_09508 PIIN_09508 PIIN_08877 PIIN_08877 PIIN_08693 PIIN_08693 PIIN_08083 PIIN_08083 PIIN_07854 PIIN_07854 PIIN_07393 PIIN_07393 PIIN_07179 PIIN_07179 PIIN_07174 PIIN_07174 PIIN_07022 PIIN_07022 PIIN_06997 PIIN_06997
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_00606Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4811 aa)
PIIN_01032Related to SSF1-nucleolar protein involved in the assembly of the large ribosomal subunit. (404 aa)
PIIN_01226PUM-HD domain-containing protein. (653 aa)
PIIN_01228Uncharacterized protein. (388 aa)
PIIN_01284Related to MNR2-Manganese resistance protein. (739 aa)
PIIN_01290CLP1_P domain-containing protein. (681 aa)
PIIN_01330Related to RLP24-Ribosomal Like Protein 24, part of a pre-60S complex. (210 aa)
PIIN_11758Probable LSG1-Large-Subunit GTPase involved in 60S ribosomal subunit biogenesis. (650 aa)
PIIN_01408Probable ribosomal protein L35. (124 aa)
PIIN_01440Uncharacterized protein. (612 aa)
PIIN_01598NopRA1 domain-containing protein. (353 aa)
PIIN_01597Npa1 domain-containing protein. (1085 aa)
PIIN_01635Related to LAS1-Protein involved in cell morphogenesis, cytoskeletal regulation and bud formation. (256 aa)
PIIN_0169560S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
PIIN_01833Probable RLI1-protein promoting preinitiation complex assembly. (602 aa)
PIIN_01907Uncharacterized protein. (704 aa)
PIIN_02150annotation not available (735 aa)
PIIN_02173Related to REX4-strong similarity to X.laevis XPMC2 protein. (397 aa)
PIIN_02255Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
PIIN_02252Related to WD repeat-containing protein JIP5-Cryptococcus neoformans. (420 aa)
PIIN_02398Related to RRP5-processing of pre-ribosomal RNA. (1501 aa)
PIIN_02720Probable ribosomal protein L26. (136 aa)
PIIN_03034Uncharacterized protein. (236 aa)
PIIN_03066Related to DRS1-RNA helicase of the DEAD box family; Belongs to the DEAD box helicase family. (767 aa)
PIIN_03115Uncharacterized protein. (446 aa)
PIIN_03135Probable NOP2-nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (683 aa)
PIIN_03224Related to NOC2-Crucial for intranuclear movement of ribosomal particles. (725 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (757 aa)
PIIN_03613Related to BRX1-Essential nucleolar protein required for biogenesis of the 60S ribosomal subunit. (319 aa)
PIIN_04149Related to protein RPF2 involved in ribosomal large subunit assembly and maintenance. (356 aa)
PIIN_04246Related to microtubule binding protein YTM1-Laccaria bicolor. (215 aa)
PIIN_04534Probable 60S large subunit ribosomal protein L6. (242 aa)
PIIN_04750Related to AFG2-ATPase of the CDC48/PAS1/SEC18 (AAA) family. (709 aa)
PIIN_04759Related to EBP2-required for pre-rRNA processing and ribosomal subunit assembly. (390 aa)
PIIN_00460Protein MAK16; Belongs to the MAK16 family. (325 aa)
PIIN_00372Uncharacterized protein. (707 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (245 aa)
PIIN_05517Uncharacterized protein. (879 aa)
PIIN_05179Uncharacterized protein. (803 aa)
PIIN_05172Uncharacterized protein. (648 aa)
PIIN_05111Uncharacterized protein. (517 aa)
PIIN_05032Related to dnaJ-like proteins. (605 aa)
PIIN_04892Uncharacterized protein. (484 aa)
PIIN_04778Probable RPL33B-ribosomal protein L35a.e.c15. (161 aa)
PIIN_00307Uncharacterized protein. (382 aa)
PIIN_00236Rsa3 domain-containing protein. (93 aa)
PIIN_00044C2H2-type domain-containing protein. (473 aa)
PIIN_00914Probable RPP0-acidic ribosomal protein L10.e. (367 aa)
PIIN_00885Related to NOP15-protein involved in 60S ribosomal subunit biogenesis. (360 aa)
PIIN_00831Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (757 aa)
PIIN_00729RNA helicase. (641 aa)
PIIN_06897Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (435 aa)
PIIN_06728Probable RPL10-60S large subunit ribosomal protein L10. (216 aa)
PIIN_06663Probable RPL8B-60s large subunit ribosomal protein L7a.e.B. (281 aa)
PIIN_06394HIT-type domain-containing protein. (376 aa)
PIIN_06387Probable RPL14B-ribosomal protein. (138 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (1111 aa)
PIIN_06143annotation not available (511 aa)
PIIN_05488DUF2470 domain-containing protein. (225 aa)
PIIN_01756Probable ribosomal protein L10a.e, cytosolic. (232 aa)
PIIN_00691RNA helicase. (559 aa)
PIIN_11712Related to RPF1-involved in the assembly of the large ribosomal subunit. (347 aa)
PIIN_02955Uncharacterized protein. (228 aa)
PIIN_10226Related to Nucleolar protein NOP4. (850 aa)
PIIN_11802Related to pescadillo development protein. (452 aa)
PIIN_09629Related to Angio-associated migratory cell protein. (417 aa)
PIIN_09589Probable RPL25-ribosomal protein L23a.e; Belongs to the universal ribosomal protein uL23 family. (152 aa)
PIIN_09508Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (258 aa)
PIIN_08877Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (191 aa)
PIIN_08693Related to TRM112-subunit of an adoMet-dependent tRNA methyltransferase (MTase) complex. (124 aa)
PIIN_08083Probable RPL5-60S large subunit ribosomal protein L5.e. (314 aa)
PIIN_07854Related to DBP3-Putative RNA helicase required for pre-rRNA processing; Belongs to the DEAD box helicase family. (556 aa)
PIIN_07393Related to NUG1-Nuclear GTPase (Involved in Ribosome biogenesis). (548 aa)
PIIN_07179Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (666 aa)
PIIN_07174Probable NSA2-involved in biogenesis of ribosomal large subunit. (219 aa)
PIIN_07022ATP-dependent RNA helicase DBP10. (955 aa)
PIIN_06997Probable 60s ribosomal protein L7 subunit. (250 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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