STRINGSTRING
PIIN_05092 PIIN_05092 PIIN_03401 PIIN_03401 PIIN_08434 PIIN_08434 PIIN_08401 PIIN_08401
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_05092Related to tRNA pseudouridine synthase B. (389 aa)
PIIN_03401Related to DEG1-pseudouridine synthase. (423 aa)
PIIN_08434Probable CBF5-Centromere Binding Factor / putative rRNA pseuduridine synthase. (532 aa)
PIIN_08401Related to PUS1-pseudouridine synthase 1. (581 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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