14 items (Serendipita indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PIIN_10745	DUF89 domain-containing protein. (98 aa)
	PIIN_00564	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (655 aa)
	PIIN_00777	Uncharacterized protein. (322 aa)
	PIIN_01069	WD_REPEATS_REGION domain-containing protein. (471 aa)
	PIIN_01373	Uncharacterized protein. (615 aa)
	PIIN_02179	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (545 aa)
	PIIN_02384	Related to MGS1-Maintenance of Genome Stability 1. (599 aa)
	PIIN_03985	Uncharacterized protein. (577 aa)
	PIIN_04187	Plus3 domain-containing protein. (523 aa)
	PIIN_06553	Serine/threonine-protein phosphatase. (278 aa)
	PIIN_07947	Uncharacterized protein. (337 aa)
	PIIN_08019	Related to pleiotropic drug resistance control protein PDR6. (1142 aa)
	PIIN_08148	Uncharacterized protein. (425 aa)
	PIIN_00522	TPR_REGION domain-containing protein. (1400 aa)

Your Current Organism:

Serendipita indica

NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PIIN_00522	PIIN_04187	G4U2U2	G4TFZ9	TPR_REGION domain-containing protein.	Plus3 domain-containing protein.	0.408
PIIN_00564	PIIN_01069	G4T658	G4T7G6	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	WD_REPEATS_REGION domain-containing protein.	0.752
PIIN_00564	PIIN_08148	G4T658	G4TSA2	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	Uncharacterized protein.	0.746
PIIN_00777	PIIN_06553	G4T6K0	G4TMS3	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.976
PIIN_00777	PIIN_08019	G4T6K0	G4TRX2	Uncharacterized protein.	Related to pleiotropic drug resistance control protein PDR6.	0.978
PIIN_01069	PIIN_00564	G4T7G6	G4T658	WD_REPEATS_REGION domain-containing protein.	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	0.752
PIIN_01069	PIIN_08148	G4T7G6	G4TSA2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.651
PIIN_01373	PIIN_10745	G4T8A3	G4TZL4	Uncharacterized protein.	DUF89 domain-containing protein.	0.518
PIIN_04187	PIIN_00522	G4TFZ9	G4U2U2	Plus3 domain-containing protein.	TPR_REGION domain-containing protein.	0.408
PIIN_06553	PIIN_00777	G4TMS3	G4T6K0	Serine/threonine-protein phosphatase.	Uncharacterized protein.	0.976
PIIN_06553	PIIN_08019	G4TMS3	G4TRX2	Serine/threonine-protein phosphatase.	Related to pleiotropic drug resistance control protein PDR6.	0.994
PIIN_08019	PIIN_00777	G4TRX2	G4T6K0	Related to pleiotropic drug resistance control protein PDR6.	Uncharacterized protein.	0.978
PIIN_08019	PIIN_06553	G4TRX2	G4TMS3	Related to pleiotropic drug resistance control protein PDR6.	Serine/threonine-protein phosphatase.	0.994
PIIN_08148	PIIN_00564	G4TSA2	G4T658	Uncharacterized protein.	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	0.746
PIIN_08148	PIIN_01069	G4TSA2	G4T7G6	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.651
PIIN_10745	PIIN_01373	G4TZL4	G4T8A3	DUF89 domain-containing protein.	Uncharacterized protein.	0.518