STRINGSTRING
PIIN_09082 PIIN_09082 PIIN_00270 PIIN_00270 PIIN_01049 PIIN_01049 PIIN_01277 PIIN_01277 PIIN_01813 PIIN_01813 PIIN_02157 PIIN_02157 PIIN_02721 PIIN_02721 PIIN_06467 PIIN_06467 PIIN_06740 PIIN_06740 PIIN_07412 PIIN_07412 PIIN_08095 PIIN_08095
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_09082Related to SYF1-synthetic lethal with CDC40. (970 aa)
PIIN_00270Related to protein CS029, probably involved in pre-mRNA splicing. (802 aa)
PIIN_01049Uncharacterized protein. (761 aa)
PIIN_01277Probable protein CCN1-putative cell cycle control protein. (731 aa)
PIIN_01813Probable CDC40-Pre-mRNA splicing factor important for catalytic step II. (632 aa)
PIIN_02157Related to WD40-repeat protein (Notchless protein). (302 aa)
PIIN_02721Related to predicted actin-bundling protein-Laccaria bicolor. (277 aa)
PIIN_06467Probable cyclophilin E. (600 aa)
PIIN_06740RRM domain-containing protein. (128 aa)
PIIN_07412Uncharacterized protein. (1302 aa)
PIIN_08095Probable ribosomal elongation factor EF-2. (980 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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