STRINGSTRING
PIIN_08885 PIIN_08885 PIIN_00872 PIIN_00872 PIIN_01556 PIIN_01556 PIIN_05602 PIIN_05602 PIIN_07423 PIIN_07423 PIIN_00544 PIIN_00544
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_08885Uncharacterized protein. (595 aa)
PIIN_00872VHS domain-containing protein. (1011 aa)
PIIN_01556Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. (673 aa)
PIIN_05602Related to HSE1-protein binds ubiquitin and mediates endosomal protein sorting. (142 aa)
PIIN_07423Related to GGA2-Arf-binding protein. (589 aa)
PIIN_00544Related to LSB5-possible role in the regulation of actin cytoskeletal organization. (490 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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