(25 nodes) Ribosomal protein S5 domain 2-type fold, subgroup network (Serendipita indica)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Predicted Interactions

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Your Input:
	PIIN_04665	Related to PMS1-DNA mismatch repair protein. (876 aa)
	PIIN_00603	Uncharacterized protein. (640 aa)
	PIIN_01134	Related to MRPS5-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS5 family. (426 aa)
	PIIN_01434	Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family. (412 aa)
	PIIN_01492	Related to DNA topoisomerase II. (212 aa)
	PIIN_02428	Probable 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	PIIN_02515	Related to ERG8-phosphomevalonate kinase. (1373 aa)
	PIM1	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (1108 aa)
	MEF1	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (751 aa)
	PIIN_03638	Probable 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (258 aa)
	PIIN_04032	Related to DNA mismatch repair protein. (737 aa)
	PIIN_05237	Related to cystathionine beta-lyase. (923 aa)
	PIIN_05495	Probable EFT2-translation elongation factor eEF2. (845 aa)
	PIIN_05941	Related to MRPS9-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS9 family. (320 aa)
	PIIN_06465	Related to translation elongation factor 2-putative. (1049 aa)
	PIIN_06748	DNA_mis_repair domain-containing protein. (629 aa)
	PIIN_07734	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1521 aa)
	PIIN_08079	Related to galactokinase. (521 aa)
	PIIN_08095	Probable ribosomal elongation factor EF-2. (980 aa)
	PIIN_09314	Probable EFT2-translation elongation factor eEF2. (609 aa)
	PIIN_10034	Probable EFT2-translation elongation factor eEF2. (406 aa)
	PIIN_11564	Probable EFT2-translation elongation factor eEF2. (314 aa)
	PIIN_02966	Probable EFT2-translation elongation factor eEF2. (786 aa)
	PIIN_03424	Probable THR1-homoserine kinase. (345 aa)
	PIIN_00123	Lon protease homolog; Belongs to the peptidase S16 family. (915 aa)

Your Current Organism:

Serendipita indica

NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MEF1	PIIN_01134	G4TDP7	G4T7K4	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Related to MRPS5-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS5 family.	0.822
MEF1	PIIN_02428	G4TDP7	G4TB80	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Probable 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.758
MEF1	PIIN_03638	G4TDP7	G4TEF5	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Probable 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.947
MEF1	PIIN_05941	G4TDP7	G4TL13	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Related to MRPS9-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS9 family.	0.838
PIIN_01134	MEF1	G4T7K4	G4TDP7	Related to MRPS5-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS5 family.	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.822
PIIN_01134	PIIN_02428	G4T7K4	G4TB80	Related to MRPS5-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS5 family.	Probable 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.967
PIIN_01134	PIIN_02966	G4T7K4	G4U2F2	Related to MRPS5-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS5 family.	Probable EFT2-translation elongation factor eEF2.	0.789
PIIN_01134	PIIN_03638	G4T7K4	G4TEF5	Related to MRPS5-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS5 family.	Probable 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.835
PIIN_01134	PIIN_05495	G4T7K4	G4TJR5	Related to MRPS5-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS5 family.	Probable EFT2-translation elongation factor eEF2.	0.789
PIIN_01134	PIIN_05941	G4T7K4	G4TL13	Related to MRPS5-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS5 family.	Related to MRPS9-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS9 family.	0.999
PIIN_01134	PIIN_06465	G4T7K4	G4TMJ4	Related to MRPS5-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS5 family.	Related to translation elongation factor 2-putative.	0.789
PIIN_01134	PIIN_08095	G4T7K4	G4TS48	Related to MRPS5-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS5 family.	Probable ribosomal elongation factor EF-2.	0.789
PIIN_01134	PIIN_09314	G4T7K4	G4TVI6	Related to MRPS5-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS5 family.	Probable EFT2-translation elongation factor eEF2.	0.789
PIIN_01134	PIIN_10034	G4T7K4	G4TXJ1	Related to MRPS5-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS5 family.	Probable EFT2-translation elongation factor eEF2.	0.789
PIIN_01134	PIIN_11564	G4T7K4	G4U1Z4	Related to MRPS5-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS5 family.	Probable EFT2-translation elongation factor eEF2.	0.789
PIIN_01434	PIIN_02515	G4T8G5	G4TBE6	Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.	Related to ERG8-phosphomevalonate kinase.	0.919
PIIN_02428	MEF1	G4TB80	G4TDP7	Probable 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.758
PIIN_02428	PIIN_01134	G4TB80	G4T7K4	Probable 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	Related to MRPS5-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS5 family.	0.967
PIIN_02428	PIIN_02966	G4TB80	G4U2F2	Probable 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	Probable EFT2-translation elongation factor eEF2.	0.869
PIIN_02428	PIIN_03638	G4TB80	G4TEF5	Probable 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	Probable 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.999