STRINGSTRING
PIIN_04709 PIIN_04709 PIIN_03894 PIIN_03894 FEN1 FEN1 PIIN_01260 PIIN_01260 PIIN_06695 PIIN_06695 PIIN_06722 PIIN_06722 PIIN_05523 PIIN_05523 PIIN_06814 PIIN_06814 PIIN_08962 PIIN_08962 PIIN_07867 PIIN_07867 PIIN_05117 PIIN_05117 PIIN_10044 PIIN_10044
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_04709Related to RAD2-structure-specific nuclease of the nucleotide excision repairosome. (1153 aa)
PIIN_03894PINc domain-containing protein. (376 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (366 aa)
PIIN_01260annotation not available (272 aa)
PIIN_06695annotation not available (196 aa)
PIIN_06722Related to EXO1-exonuclease which interacts with Msh2p. (827 aa)
PIIN_05523PINc domain-containing protein. (1138 aa)
PIIN_06814Probable DIS3 3`-5` exoribonuclease required for 3` end formation of 5.8S rRNA; Belongs to the RNR ribonuclease family. (1006 aa)
PIIN_08962Related to RAD27-ssDNA endonuclease and 5`-3`exonuclease. (498 aa)
PIIN_07867Related to DNA repair endonuclease rad2. (978 aa)
PIIN_05117Related to MKT1-retroviral protease signature protein. (817 aa)
PIIN_10044Uncharacterized protein. (901 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.