STRINGSTRING
PIIN_04875 PIIN_04875 PIIN_00342 PIIN_00342 PIIN_02785 PIIN_02785 PIIN_03698 PIIN_03698 PIIN_07036 PIIN_07036 PIIN_07486 PIIN_07486
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_04875Related to Exosome complex exonuclease RRP43. (279 aa)
PIIN_00342Probable exosome complex exonuclease rrp41. (277 aa)
PIIN_02785RNase_PH domain-containing protein. (333 aa)
PIIN_03698Probable RRP45-Exosome complex exonuclease. (313 aa)
PIIN_07036RNase_PH domain-containing protein. (267 aa)
PIIN_07486RNase_PH domain-containing protein. (244 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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