STRINGSTRING
PIIN_07045 PIIN_07045 PIIN_03969 PIIN_03969 PIIN_03826 PIIN_03826 PIIN_03333 PIIN_03333 PIIN_03177 PIIN_03177 PIIN_03154 PIIN_03154 PIIN_02737 PIIN_02737 PIIN_02592 PIIN_02592 PIIN_02619 PIIN_02619 PIIN_02460 PIIN_02460 PIIN_02455 PIIN_02455 PIIN_02200 PIIN_02200 PIIN_01704 PIIN_01704 PIIN_01582 PIIN_01582 PIIN_01555 PIIN_01555 PIIN_01483 PIIN_01483 PIIN_01403 PIIN_01403 PIIN_01104 PIIN_01104 PIIN_11724 PIIN_11724 PIIN_00265 PIIN_00265 PIIN_04265 PIIN_04265 PIIN_04681 PIIN_04681 PIIN_04796 PIIN_04796 PIIN_05020 PIIN_05020 PIIN_05380 PIIN_05380 PIIN_05958 PIIN_05958 PIIN_05963 PIIN_05963 PIIN_06342 PIIN_06342 PIIN_06740 PIIN_06740 PIIN_07459 PIIN_07459 PIIN_07833 PIIN_07833 PIIN_07839 PIIN_07839 PIIN_08406 PIIN_08406 PIIN_08677 PIIN_08677 PIIN_09173 PIIN_09173 PIIN_09355 PIIN_09355 PIIN_09538 PIIN_09538 PIIN_09559 PIIN_09559 PIIN_11763 PIIN_11763
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_07045Uncharacterized protein. (1104 aa)
PIIN_03969Related to Cyclin H; Belongs to the cyclin family. (397 aa)
PIIN_03826General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (386 aa)
PIIN_03333Related to UBI4-Ubiquitin. (195 aa)
PIIN_03177Related to COP9 signalosome complex subunit 6. (340 aa)
PIIN_03154Probable SSL2-DNA helicase. (837 aa)
PIIN_02737Probable 25 kD subunit of DNA-directed RNA polymerases I, II and III. (211 aa)
PIIN_02592Probable COP9 signalosome complex subunit 2. (467 aa)
PIIN_02619Probable DNA-directed RNA polymerase II chain Rpb7. (170 aa)
PIIN_02460Related to ACOB protein. (293 aa)
PIIN_02455Related to cullin 4A; Belongs to the cullin family. (658 aa)
PIIN_02200Related to TFB1-subunit of RNA polymerase II transcription initiation factor TFIIH. (580 aa)
PIIN_01704Probable KIN28-cyclin-dependent ser/thr protein kinase; Belongs to the protein kinase superfamily. (377 aa)
PIIN_01582CYCLIN domain-containing protein; Belongs to the cyclin family. (380 aa)
PIIN_01555DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1796 aa)
PIIN_01483CPSF_A domain-containing protein. (1145 aa)
PIIN_01403Related to RPB3-DNA-directed RNA polymerase II chain. (336 aa)
PIIN_01104Uncharacterized protein. (72 aa)
PIIN_11724MAT1 domain-containing protein. (165 aa)
PIIN_00265Related to COP9-signalosome complex subunit 4. (451 aa)
PIIN_04265Related to UBI4-Ubiquitin. (222 aa)
PIIN_04681Probable ubiquitin/ribosomal protein S27a fusion protein. (158 aa)
PIIN_04796Uncharacterized protein. (88 aa)
PIIN_05020CIA30 domain-containing protein. (200 aa)
PIIN_05380Uncharacterized protein. (319 aa)
PIIN_05958Related to TFIIH basal transcription factor complex p34 subunit. (355 aa)
PIIN_05963Probable COP9 signalosome subunit 5 CSN5. (369 aa)
PIIN_06342RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
PIIN_06740RRM domain-containing protein. (128 aa)
PIIN_07459Related to DNA-directed RNA polymerase 13.3K chain. (138 aa)
PIIN_07833Probable DNA-directed RNA polymerase II 14.5 kDa polypeptide; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (131 aa)
PIIN_07839Related to COP9 signalosome complex subunit 1. (477 aa)
PIIN_08406RPOL4c domain-containing protein. (135 aa)
PIIN_08677PCI domain-containing protein. (428 aa)
PIIN_09173Probable ring-box protein 1. (114 aa)
PIIN_09355DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1223 aa)
PIIN_09538Probable Rpo26-18kD subunit of DNA-directed RNA polymerases I, II, III. (164 aa)
PIIN_09559Uncharacterized protein. (136 aa)
PIIN_11763Probable RAD3-DNA helicase/ATPase. (798 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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