STRINGSTRING
PIIN_07459 PIIN_07459 PIIN_09355 PIIN_09355 PIIN_08437 PIIN_08437 PIIN_08406 PIIN_08406 PIIN_08258 PIIN_08258 PIIN_07833 PIIN_07833 PIIN_07686 PIIN_07686 PIIN_07290 PIIN_07290 PIIN_06739 PIIN_06739 PIIN_06737 PIIN_06737 PIIN_06629 PIIN_06629 PIIN_06342 PIIN_06342 PIIN_05958 PIIN_05958 PIIN_05441 PIIN_05441 PIIN_04924 PIIN_04924 PIIN_04841 PIIN_04841 PIIN_04796 PIIN_04796 PIIN_04655 PIIN_04655 PIIN_04481 PIIN_04481 PIIN_04029 PIIN_04029 PIIN_03969 PIIN_03969 PIIN_03826 PIIN_03826 PIIN_03728 PIIN_03728 PIIN_03711 PIIN_03711 PIIN_03695 PIIN_03695 PIIN_03509 PIIN_03509 PIIN_03154 PIIN_03154 PIIN_02938 PIIN_02938 PIIN_02737 PIIN_02737 PIIN_02619 PIIN_02619 PIIN_02419 PIIN_02419 PIIN_02200 PIIN_02200 PIIN_01792 PIIN_01792 PIIN_01704 PIIN_01704 PIIN_01582 PIIN_01582 PIIN_01555 PIIN_01555 PIIN_01403 PIIN_01403 PIIN_01104 PIIN_01104 PIIN_11724 PIIN_11724 PIIN_00750 PIIN_00750 PIIN_00585 PIIN_00585 PIIN_00383 PIIN_00383 PIIN_00255 PIIN_00255 PIIN_00226 PIIN_00226 PIIN_00150 PIIN_00150 PIIN_11763 PIIN_11763 PIIN_00536 PIIN_00536 PIIN_10512 PIIN_10512 PIIN_10175 PIIN_10175 PIIN_09710 PIIN_09710 PIIN_09559 PIIN_09559 PIIN_09538 PIIN_09538
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_07459Related to DNA-directed RNA polymerase 13.3K chain. (138 aa)
PIIN_09355DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1223 aa)
PIIN_08437WD_REPEATS_REGION domain-containing protein. (1200 aa)
PIIN_08406RPOL4c domain-containing protein. (135 aa)
PIIN_08258Uncharacterized protein. (331 aa)
PIIN_07833Probable DNA-directed RNA polymerase II 14.5 kDa polypeptide; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (131 aa)
PIIN_07686Related to TFA1-TFIIE subunit (Transcription initiation factor), 66 kD. (559 aa)
PIIN_07290Related to WD40-repeat protein (Notchless protein). (242 aa)
PIIN_06739Uncharacterized protein. (166 aa)
PIIN_06737DUF4211 domain-containing protein. (510 aa)
PIIN_06629Related to WD40-repeat protein (Notchless protein). (914 aa)
PIIN_06342RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
PIIN_05958Related to TFIIH basal transcription factor complex p34 subunit. (355 aa)
PIIN_05441Related to TAF5-TFIID and SAGA subunit. (825 aa)
PIIN_04924Related to TAF6-Subunit (60 kDa) of TFIID and SAGA complexes. (525 aa)
PIIN_04841Uncharacterized protein. (158 aa)
PIIN_04796Uncharacterized protein. (88 aa)
PIIN_04655TAF4 domain-containing protein. (365 aa)
PIIN_04481Related to TOA1-transcription factor TFIIA-L. (477 aa)
PIIN_04029BTB domain-containing protein. (768 aa)
PIIN_03969Related to Cyclin H; Belongs to the cyclin family. (397 aa)
PIIN_03826General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (386 aa)
PIIN_03728Related to WD40-repeat protein (Notchless protein). (995 aa)
PIIN_03711Related to TAF7-TFIID subunit (TBP-associated factor), 67 kD. (459 aa)
PIIN_03695WD_REPEATS_REGION domain-containing protein. (827 aa)
PIIN_03509TFIID_20kDa domain-containing protein. (330 aa)
PIIN_03154Probable SSL2-DNA helicase. (837 aa)
PIIN_02938Related to RRS1-regulator of ribosome biogenesis. (668 aa)
PIIN_02737Probable 25 kD subunit of DNA-directed RNA polymerases I, II and III. (211 aa)
PIIN_02619Probable DNA-directed RNA polymerase II chain Rpb7. (170 aa)
PIIN_02419Related to TAF1-TFIID subunit (TBP-associated factor), 145 kD. (1059 aa)
PIIN_02200Related to TFB1-subunit of RNA polymerase II transcription initiation factor TFIIH. (580 aa)
PIIN_01792Related to TAF2-component of TFIID complex. (1782 aa)
PIIN_01704Probable KIN28-cyclin-dependent ser/thr protein kinase; Belongs to the protein kinase superfamily. (377 aa)
PIIN_01582CYCLIN domain-containing protein; Belongs to the cyclin family. (380 aa)
PIIN_01555DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1796 aa)
PIIN_01403Related to RPB3-DNA-directed RNA polymerase II chain. (336 aa)
PIIN_01104Uncharacterized protein. (72 aa)
PIIN_11724MAT1 domain-containing protein. (165 aa)
PIIN_00750Probable TATA-box-binding factor TBP. (297 aa)
PIIN_00585Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (125 aa)
PIIN_00383TAFII28 domain-containing protein. (225 aa)
PIIN_00255TFIIE beta domain-containing protein. (246 aa)
PIIN_00226Uncharacterized protein. (888 aa)
PIIN_00150Uncharacterized protein. (800 aa)
PIIN_11763Probable RAD3-DNA helicase/ATPase. (798 aa)
PIIN_00536Probable TAF10-TFIID and SAGA subunit. (128 aa)
PIIN_10512WD_REPEATS_REGION domain-containing protein. (181 aa)
PIIN_10175WD_REPEATS_REGION domain-containing protein. (978 aa)
PIIN_09710WD_REPEATS_REGION domain-containing protein. (225 aa)
PIIN_09559Uncharacterized protein. (136 aa)
PIIN_09538Probable Rpo26-18kD subunit of DNA-directed RNA polymerases I, II, III. (164 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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