STRINGSTRING
PIIN_11037 PIIN_11037 PIIN_00102 PIIN_00102 PIIN_00005 PIIN_00005 PIIN_00165 PIIN_00165 PIIN_00422 PIIN_00422 PIIN_00457 PIIN_00457 PIIN_00462 PIIN_00462 PIIN_00846 PIIN_00846 PIIN_00966 PIIN_00966 PIIN_01104 PIIN_01104 PIIN_01403 PIIN_01403 PIIN_01555 PIIN_01555 PIIN_01542 PIIN_01542 PIIN_02188 PIIN_02188 PIIN_02283 PIIN_02283 PIIN_02433 PIIN_02433 PIIN_02619 PIIN_02619 PIIN_02737 PIIN_02737 PIIN_03357 PIIN_03357 PIIN_04292 PIIN_04292 PIIN_04796 PIIN_04796 PIIN_04827 PIIN_04827 PIIN_05650 PIIN_05650 PIIN_05768 PIIN_05768 PIIN_05978 PIIN_05978 PIIN_06230 PIIN_06230 PIIN_06751 PIIN_06751 PIIN_07355 PIIN_07355 PIIN_07459 PIIN_07459 PIIN_07617 PIIN_07617 PIIN_07833 PIIN_07833 PIIN_08406 PIIN_08406 PIIN_08691 PIIN_08691 PIIN_08762 PIIN_08762 PIIN_09165 PIIN_09165 PIIN_09355 PIIN_09355 PIIN_09410 PIIN_09410 PIIN_09538 PIIN_09538 PIIN_09660 PIIN_09660 PIIN_11743 PIIN_11743 PIIN_02981 PIIN_02981 PIIN_11152 PIIN_11152
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_11037Probable RPA135-DNA-directed RNA polymerase I, 135 KD subunit; Belongs to the RNA polymerase beta chain family. (268 aa)
PIIN_00102Related to endonuclease/exonuclease/phosphatase family protein-Penicillium marneffei. (296 aa)
PIIN_00005Related to transcription elongation factor TFIIS. (280 aa)
PIIN_00165Uncharacterized protein. (420 aa)
PIIN_00422Uncharacterized protein. (756 aa)
PIIN_00457TFIIS central domain-containing protein. (833 aa)
PIIN_00462DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1118 aa)
PIIN_00846DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1371 aa)
PIIN_00966RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (530 aa)
PIIN_01104Uncharacterized protein. (72 aa)
PIIN_01403Related to RPB3-DNA-directed RNA polymerase II chain. (336 aa)
PIIN_01555DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1796 aa)
PIIN_01542DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (127 aa)
PIIN_02188RPA43_OB domain-containing protein. (250 aa)
PIIN_02283Uncharacterized protein. (340 aa)
PIIN_02433Endo/exonuclease/phosphatase domain-containing protein. (260 aa)
PIIN_02619Probable DNA-directed RNA polymerase II chain Rpb7. (170 aa)
PIIN_02737Probable 25 kD subunit of DNA-directed RNA polymerases I, II and III. (211 aa)
PIIN_03357Related to RPC53-47 kD subunit of DNA-directed RNA polymerase III. (315 aa)
PIIN_04292RNA_pol_L_2 domain-containing protein. (97 aa)
PIIN_04796Uncharacterized protein. (88 aa)
PIIN_04827Related to RPC34-DNA-directed RNA polymerase III, 34 KD subunit. (468 aa)
PIIN_05650Probable RPA135-DNA-directed RNA polymerase I, 135 KD subunit. (410 aa)
PIIN_05768Uncharacterized protein. (336 aa)
PIIN_05978Uncharacterized protein. (257 aa)
PIIN_06230Related to RPC25-DNA-direcred RNA polymerase III, 25 KD subunit. (227 aa)
PIIN_06751DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1755 aa)
PIIN_07355Probable Rpc40-40 kD subunit of DNA-directed RNA polymerases I and III. (382 aa)
PIIN_07459Related to DNA-directed RNA polymerase 13.3K chain. (138 aa)
PIIN_07617Probable RPA135-DNA-directed RNA polymerase I, 135 KD subunit; Belongs to the RNA polymerase beta chain family. (528 aa)
PIIN_07833Probable DNA-directed RNA polymerase II 14.5 kDa polypeptide; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (131 aa)
PIIN_08406RPOL4c domain-containing protein. (135 aa)
PIIN_08691Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. (559 aa)
PIIN_08762Uncharacterized protein. (390 aa)
PIIN_09165RBR-type E3 ubiquitin transferase. (475 aa)
PIIN_09355DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1223 aa)
PIIN_09410Uncharacterized protein. (103 aa)
PIIN_09538Probable Rpo26-18kD subunit of DNA-directed RNA polymerases I, II, III. (164 aa)
PIIN_09660BTB domain-containing protein. (563 aa)
PIIN_11743Probable Rpc11-DNA-directed RNA polymerase III subunit C11. (98 aa)
PIIN_02981DPH-type MB domain-containing protein. (189 aa)
PIIN_11152DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (219 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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