STRINGSTRING
MAGb_7690 MAGb_7690 MAGb_4650 MAGb_4650 MAGb_4660 MAGb_4660 nusG nusG MAGb_4930 MAGb_4930 rluB rluB fba fba hprK hprK pdhA pdhA pdhB pdhB cdd cdd pepP pepP MAGb_5660 MAGb_5660 folD folD engB engB dnaK dnaK def def MAGb_6180 MAGb_6180 tkt tkt rpe rpe pyrG pyrG ruvB ruvB MAGb_6750 MAGb_6750 ligA ligA pcrA pcrA eno eno upp upp greA greA MAGb_0680 MAGb_0680 glpK glpK MAGb_1060 MAGb_1060 acpD acpD MAGb_1360 MAGb_1360 MAGb_1500 MAGb_1500 deoD-2 deoD-2 deoA deoA map map MAGb_1690 MAGb_1690 rsuA rsuA MAGb_2200 MAGb_2200 MAGb_2590 MAGb_2590 fmt fmt sgaH sgaH MAGb_2800 MAGb_2800 MAGb_3400 MAGb_3400 rluD rluD tmk tmk MAGb_3710 MAGb_3710 rluC rluC hemK hemK MAGb_4420 MAGb_4420 MAGb_4520 MAGb_4520
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MAGb_7690Hypothetical protein. (185 aa)
MAGb_4650Hypothetical protein Yei C. (299 aa)
MAGb_4660Hydrolase of the HAD superfamily. (274 aa)
nusGTranscription antitermination protein; Participates in transcription elongation, termination and antitermination. (199 aa)
MAGb_4930Hypothetical protein, Putative deoxyribonuclease. (253 aa)
rluBRibosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. (246 aa)
fbaFructose-bisphosphate aldolase. (291 aa)
hprKHPr kinase/phosphorylase; Belongs to the HPrK/P family. (320 aa)
pdhAPyruvate dehydrogenase E1 component, alpha subunit. (363 aa)
pdhBPyruvate dehydrogenase E1 component, beta subunit. (328 aa)
cddCytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (130 aa)
pepPXAA-PRO aminopeptidase. (350 aa)
MAGb_5660Phosphoketolase. (795 aa)
folDFolD bifunctional protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (286 aa)
engBGTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. (194 aa)
dnaKChaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. (598 aa)
defFormylmethionine deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (187 aa)
MAGb_6180Hypothetical protein. (309 aa)
tktTransketolase I; Belongs to the transketolase family. (648 aa)
rpeRibulose-phosphate 3-epimerase. (220 aa)
pyrGCTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. (539 aa)
ruvBHolliday junction DNA helicase ruvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (320 aa)
MAGb_6750Hypothetical protein. (280 aa)
ligADNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. (654 aa)
pcrAATP-dependent helicase. (734 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (454 aa)
uppUracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. (208 aa)
greATranscription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. (163 aa)
MAGb_0680Hydrolase. (278 aa)
glpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (502 aa)
MAGb_1060Phosphomannomutase. (523 aa)
acpDAcyl carrier protein phosphodiesterase. (200 aa)
MAGb_1360Hypothetical protein. (278 aa)
MAGb_1500Hypothetical protein. (275 aa)
deoD-2Purine nucleoside phosphorylase. (233 aa)
deoAThymidine phosphorylase. (431 aa)
mapMethionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (249 aa)
MAGb_1690Hypothetical protein, predicted hydrolase of the HAD family. (350 aa)
rsuA16S rRNA uridine-516 pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family. (232 aa)
MAGb_2200Hypothetical protein; Belongs to the NAPRTase family. (333 aa)
MAGb_2590Hypothetical protein. (721 aa)
fmtMethionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. (279 aa)
sgaHHexulose-6-phosphate synthase. (217 aa)
MAGb_2800Hypothetical protein, predicted hydrolase of the HAD family. (285 aa)
MAGb_3400Hypothetical protein, putative RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (441 aa)
rluDRibosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (305 aa)
tmkThymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. (215 aa)
MAGb_3710Hypothetical protein, predicted hydrolase of the HAD family. (301 aa)
rluCRibosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family. (284 aa)
hemKDNA methyltransferase, HemK. (240 aa)
MAGb_4420Hypothetical protein. (74 aa)
MAGb_4520Hypothetical protein. (333 aa)
Your Current Organism:
Mycoplasma agalactiae 14628
NCBI taxonomy Id: 1110504
Other names: M. agalactiae 14628, Mycoplasma agalactiae str. 14628, Mycoplasma agalactiae strain 14628
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