STRINGSTRING
rluB rluB rsuA rsuA rluD rluD rluC rluC rpsD rpsD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rluBRibosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. (246 aa)
rsuA16S rRNA uridine-516 pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family. (232 aa)
rluDRibosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (305 aa)
rluCRibosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family. (284 aa)
rpsD30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (198 aa)
Your Current Organism:
Mycoplasma agalactiae 14628
NCBI taxonomy Id: 1110504
Other names: M. agalactiae 14628, Mycoplasma agalactiae str. 14628, Mycoplasma agalactiae strain 14628
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