STRINGSTRING
vapC vapC Mhar_0921 Mhar_0921 Mhar_1020 Mhar_1020 Mhar_1024 Mhar_1024 Mhar_1025 Mhar_1025 Mhar_2207 Mhar_2207
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
vapCHypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (127 aa)
Mhar_0921Hypothetical protein. (359 aa)
Mhar_1020Hypothetical protein. (115 aa)
Mhar_1024Hypothetical protein. (82 aa)
Mhar_1025Hypothetical protein. (103 aa)
Mhar_2207Transposase, IS4 family. (150 aa)
Your Current Organism:
Methanosaeta harundinacea
NCBI taxonomy Id: 1110509
Other names: M. harundinacea 6Ac, Methanosaeta harundinacea 6Ac, Methanosaeta sp. 6Ac
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.