STRINGSTRING
ANK11768.1 ANK11768.1 ANK13982.1 ANK13982.1 ANK12836.1 ANK12836.1 ANK12837.1 ANK12837.1 ANK12838.1 ANK12838.1 ANK14187.1 ANK14187.1 ANK14188.1 ANK14188.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ANK11768.1Beta-carotene hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)
ANK13982.1Beta-carotene ketolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
ANK12836.1Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
ANK12837.1Rossman fold protein, TIGR00730 family; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LOG family. (193 aa)
ANK12838.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)
ANK14187.1Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (483 aa)
ANK14188.1Lycopene cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa)
Your Current Organism:
Porphyrobacter neustonensis
NCBI taxonomy Id: 1112
Other names: ACM 2844, CIP 104070, DSM 9434, P. neustonensis
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