STRINGSTRING
AFA71918.1 AFA71918.1 AFA71919.1 AFA71919.1 psd psd ispD ispD ispF ispF AFA72238.1 AFA72238.1 ispE ispE AFA72530.1 AFA72530.1 AFA72589.1 AFA72589.1 AFA72620.1 AFA72620.1 xseB xseB xseA xseA AFA72623.1 AFA72623.1 ispH ispH cdsA cdsA dxr dxr ispG ispG pgsA pgsA suhB1 suhB1 dxs dxs AFA73225.1 AFA73225.1 AFA73338.1 AFA73338.1 AFA73339.1 AFA73339.1 AFA73340.1 AFA73340.1 pds pds suhB2 suhB2 AFA73811.1 AFA73811.1 AFA73818.1 AFA73818.1 uppS2 uppS2 AFA74146.1 AFA74146.1 AFA74682.1 AFA74682.1 AFA75783.1 AFA75783.1 AFA75816.1 AFA75816.1 AFA75821.1 AFA75821.1 crtB crtB idi idi AFA75917.1 AFA75917.1
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
AFA71918.1AAA family ATPase; Belongs to the AAA ATPase family. (744 aa)
AFA71919.1Putative CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (349 aa)
psdPhosphatidylserine decarboxylase proenzyme Psd; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). (245 aa)
ispD2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IspD; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). (242 aa)
ispF2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP). (183 aa)
AFA72238.1Polyprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. (360 aa)
ispE4-diphosphocytidyl-2-C-methyl-D-erythritol kinase IspE; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (319 aa)
AFA72530.1Phospholipase C. (511 aa)
AFA72589.1Putative undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (269 aa)
AFA72620.1Putative acetyltransferase. (160 aa)
xseBExodeoxyribonuclease 7 small subunit XseB; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (103 aa)
xseAExodeoxyribonuclease 7 large subunit XseA; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (436 aa)
AFA72623.1Hypothetical protein. (230 aa)
ispH4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. (317 aa)
cdsAPhosphatidate cytidylyltransferase CdsA; Belongs to the CDS family. (314 aa)
dxr1-deoxy-D-xylulose 5-phosphate reductoisomerase Dxr; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. (390 aa)
ispG4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. (402 aa)
pgsACDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase PgsA; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (234 aa)
suhB1Inositol monophosphate phosphatase SuhB; Belongs to the inositol monophosphatase superfamily. (312 aa)
dxs1-deoxy-D-xylulose-5-phosphate synthase Dxs; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. (663 aa)
AFA73225.1Putative phosphatidylinositol synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (228 aa)
AFA73338.1Flavin-binding monooxygenase-like protein. (582 aa)
AFA73339.1Lycopene cyclase family protein. (383 aa)
AFA73340.1Putative oxidoreductase, short-chain dehydrogenase/reductase family. (262 aa)
pdsPhytoene dehydrogenase Pds. (449 aa)
suhB2Inositol monophosphate phosphatase SuhB. (283 aa)
AFA73811.1Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. (384 aa)
AFA73818.11-acyl-sn-glycerol-3-phosphate acyltransferase. (235 aa)
uppS2Undecaprenyl pyrophosphate synthase 2; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (273 aa)
AFA74146.11-acyl-sn-glycerol-3-phosphate acyltransferase. (226 aa)
AFA74682.1Putative CDP-diacylglycerol pyrophosphatase. (293 aa)
AFA75783.1FAD dependent oxidoreductase. (614 aa)
AFA75816.1Putative geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. (369 aa)
AFA75821.1Phytoene desaturase. (526 aa)
crtBPhytoene synthase CrtB; Geranylgeranyl-diphosphate geranylgeranyltransferase. (307 aa)
idiIsopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). (185 aa)
AFA75917.1Inositol-3-phosphate synthase. (338 aa)
Your Current Organism:
Gordonia polyisoprenivorans
NCBI taxonomy Id: 1112204
Other names: G. polyisoprenivorans VH2, Gordonia polyisoprenivorans VH2, Gordonia polyisoprenivorans str. VH2, Gordonia polyisoprenivorans strain VH2
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